Difference between revisions of "GLUTDECARBOX-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] == * direction: ** left-to-right * common-name: ** itaconyl-coa synthetase * ec-...")
 
(Created page with "Category:reaction == Reaction GLUTDECARBOX-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.15 ec-4.1.1.15] == Reaction formula == *...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] ==
+
== Reaction GLUTDECARBOX-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** itaconyl-coa synthetase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.4 ec-6.2.1.4]
+
** [http://enzyme.expasy.org/EC/4.1.1.15 ec-4.1.1.15]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[ITACONATE]][c] '''=>''' 1 [[CPD-1137]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[4-AMINO-BUTYRATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03269]]
+
* Gene: [[SJ12405]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ21782]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5749]], itaconate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5749 PWY-5749]
+
* [[PWY0-1305]], L-glutamate degradation IX (via 4-aminobutanoate):
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[GLUDEG-I-PWY]], GABA shunt:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-4321]], L-glutamate degradation IV:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR95942
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17786 17786]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02405 R02405]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00261 R00261]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P20228 P20228]
 +
** [http://www.uniprot.org/uniprot/Q05329 Q05329]
 +
** [http://www.uniprot.org/uniprot/P18088 P18088]
 +
** [http://www.uniprot.org/uniprot/P14748 P14748]
 +
** [http://www.uniprot.org/uniprot/Q07346 Q07346]
 +
** [http://www.uniprot.org/uniprot/Q99259 Q99259]
 +
** [http://www.uniprot.org/uniprot/P69910 P69910]
 +
** [http://www.uniprot.org/uniprot/Q9CG20 Q9CG20]
 +
** [http://www.uniprot.org/uniprot/P48321 P48321]
 +
** [http://www.uniprot.org/uniprot/P48319 P48319]
 +
** [http://www.uniprot.org/uniprot/Q05683 Q05683]
 +
** [http://www.uniprot.org/uniprot/Q24062 Q24062]
 +
** [http://www.uniprot.org/uniprot/P69908 P69908]
 +
** [http://www.uniprot.org/uniprot/P48320 P48320]
 +
** [http://www.uniprot.org/uniprot/Q59956 Q59956]
 +
** [http://www.uniprot.org/uniprot/P48318 P48318]
 +
** [http://www.uniprot.org/uniprot/Q49854 Q49854]
 +
** [http://www.uniprot.org/uniprot/Q49855 Q49855]
 +
** [http://www.uniprot.org/uniprot/Q49863 Q49863]
 +
** [http://www.uniprot.org/uniprot/O81101 O81101]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=itaconyl-coa synthetase}}
+
{{#set: ec-number=ec-4.1.1.15}}
−
{{#set: ec-number=ec-6.2.1.4}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:21, 18 March 2021

Reaction GLUTDECARBOX-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1305, L-glutamate degradation IX (via 4-aminobutanoate):
    • 1 reactions found over 1 reactions in the full pathway
  • GLUDEG-I-PWY, GABA shunt:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-4321, L-glutamate degradation IV:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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