Difference between revisions of "GLUTRNAREDUCT-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHONDROITIN-4-SULFOTRANSFERASE-RXN CHONDROITIN-4-SULFOTRANSFERASE-RXN] == * direction: ** left-to-r...")
(Created page with "Category:reaction == Reaction 3.2.1.106-RXN == * direction: ** left-to-right * common-name: ** mannosyl-oligosaccharide glucosidase * ec-number: ** [http://enzyme.expasy.o...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHONDROITIN-4-SULFOTRANSFERASE-RXN CHONDROITIN-4-SULFOTRANSFERASE-RXN] ==
+
== Reaction 3.2.1.106-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** chondroitin 4-sulfotransferase
+
** mannosyl-oligosaccharide glucosidase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.8.2.5 ec-2.8.2.5]
+
** [http://enzyme.expasy.org/EC/3.2.1.106 ec-3.2.1.106]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Chondroitin-N-acetyl-galactosamines]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[CHONDROITIN-4-SULFATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-18077]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLC]][c] '''+''' 1 [[Glc2Man9GlcNAc2-proteins]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ00043]]
+
* Gene: [[SJ20354]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6567]], chondroitin sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6567 PWY-6567]
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* [[PWY-7918]], protein N-glycosylation processing phase (yeast):
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7919]], protein N-glycosylation processing phase (plants and animals):
 +
** '''1''' reactions found over '''20''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16102 16102]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02180 R02180]
 
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/Q9NPF2 Q9NPF2]
+
** [http://www.uniprot.org/uniprot/O14255 O14255]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=chondroitin 4-sulfotransferase}}
+
{{#set: common-name=mannosyl-oligosaccharide glucosidase}}
{{#set: ec-number=ec-2.8.2.5}}
+
{{#set: ec-number=ec-3.2.1.106}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:39, 18 December 2020

Reaction 3.2.1.106-RXN

  • direction:
    • left-to-right
  • common-name:
    • mannosyl-oligosaccharide glucosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7918, protein N-glycosylation processing phase (yeast):
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7919, protein N-glycosylation processing phase (plants and animals):
    • 1 reactions found over 20 reactions in the full pathway

Reconstruction information

External links