Difference between revisions of "GLY3KIN-RXN"

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(Created page with "Category:reaction == Reaction OROPRIBTRANS-RXN == * direction: ** reversible * common-name: ** orotate phosphoribosyltransferase * ec-number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:reaction == Reaction 2-ISOPROPYLMALATESYN-RXN == * direction: ** left-to-right * common-name: ** 2-isopropylmalate synthase * ec-number: ** [http://enzyme.expasy....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction OROPRIBTRANS-RXN ==
+
== Reaction 2-ISOPROPYLMALATESYN-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** orotate phosphoribosyltransferase
+
** 2-isopropylmalate synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.10 ec-2.4.2.10]
+
** [http://enzyme.expasy.org/EC/2.3.3.13 ec-2.3.3.13]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OROTIDINE-5-PHOSPHATE]][c] '''+''' 1 [[PPI]][c] '''<=>''' 1 [[OROTATE]][c] '''+''' 1 [[PRPP]][c]
+
* 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02816]]
+
* Gene: [[SJ04717]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7791]], UMP biosynthesis III:
+
* [[LEUSYN-PWY]], L-leucine biosynthesis:
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7790]], UMP biosynthesis II:
+
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered):
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5686]], UMP biosynthesis I:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10383 10383]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21525 21525]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01870 R01870]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01213 R01213]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P08309 P08309]
+
** [http://www.uniprot.org/uniprot/P06208 P06208]
−
** [http://www.uniprot.org/uniprot/P11172 P11172]
+
** [http://www.uniprot.org/uniprot/Q58595 Q58595]
−
** [http://www.uniprot.org/uniprot/P18132 P18132]
+
** [http://www.uniprot.org/uniprot/P09151 P09151]
−
** [http://www.uniprot.org/uniprot/P77889 P77889]
+
** [http://www.uniprot.org/uniprot/Q9PLV9 Q9PLV9]
−
** [http://www.uniprot.org/uniprot/P0A5U0 P0A5U0]
+
** [http://www.uniprot.org/uniprot/Q9JUK6 Q9JUK6]
−
** [http://www.uniprot.org/uniprot/Q9PIR1 Q9PIR1]
+
** [http://www.uniprot.org/uniprot/Q58787 Q58787]
−
** [http://www.uniprot.org/uniprot/O67742 O67742]
+
** [http://www.uniprot.org/uniprot/P94565 P94565]
−
** [http://www.uniprot.org/uniprot/O58855 O58855]
+
** [http://www.uniprot.org/uniprot/Q9JP75 Q9JP75]
−
** [http://www.uniprot.org/uniprot/Q9Z7U6 Q9Z7U6]
+
** [http://www.uniprot.org/uniprot/Q02141 Q02141]
−
** [http://www.uniprot.org/uniprot/Q9Y9D8 Q9Y9D8]
+
** [http://www.uniprot.org/uniprot/P48575 P48575]
−
** [http://www.uniprot.org/uniprot/P56814 P56814]
+
** [http://www.uniprot.org/uniprot/O86511 O86511]
−
** [http://www.uniprot.org/uniprot/Q58509 Q58509]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/O28533 O28533]
+
{{#set: common-name=2-isopropylmalate synthase}}
−
** [http://www.uniprot.org/uniprot/Q9CGM8 Q9CGM8]
+
{{#set: ec-number=ec-2.3.3.13}}
−
** [http://www.uniprot.org/uniprot/P25972 P25972]
 
−
** [http://www.uniprot.org/uniprot/O27888 O27888]
 
−
** [http://www.uniprot.org/uniprot/P65915 P65915]
 
−
** [http://www.uniprot.org/uniprot/P46534 P46534]
 
−
** [http://www.uniprot.org/uniprot/P43855 P43855]
 
−
** [http://www.uniprot.org/uniprot/P31754 P31754]
 
−
** [http://www.uniprot.org/uniprot/P18904 P18904]
 
−
** [http://www.uniprot.org/uniprot/Q01637 Q01637]
 
−
** [http://www.uniprot.org/uniprot/P09556 P09556]
 
−
** [http://www.uniprot.org/uniprot/P21846 P21846]
 
−
** [http://www.uniprot.org/uniprot/P35788 P35788]
 
−
** [http://www.uniprot.org/uniprot/P08870 P08870]
 
−
** [http://www.uniprot.org/uniprot/Q18516 Q18516]
 
−
** [http://www.uniprot.org/uniprot/Q45918 Q45918]
 
−
** [http://www.uniprot.org/uniprot/Q42586 Q42586]
 
−
** [http://www.uniprot.org/uniprot/P41923 P41923]
 
−
** [http://www.uniprot.org/uniprot/Q55574 Q55574]
 
−
** [http://www.uniprot.org/uniprot/Q42942 Q42942]
 
−
** [http://www.uniprot.org/uniprot/O76139 O76139]
 
−
** [http://www.uniprot.org/uniprot/O61790 O61790]
 
−
** [http://www.uniprot.org/uniprot/Q9X8R7 Q9X8R7]
 
−
** [http://www.uniprot.org/uniprot/O94331 O94331]
 
−
** [http://www.uniprot.org/uniprot/P30402 P30402]
 
−
** [http://www.uniprot.org/uniprot/P13298 P13298]
 
−
** [http://www.uniprot.org/uniprot/P0A7E3 P0A7E3]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=orotate phosphoribosyltransferase}}
 
−
{{#set: ec-number=ec-2.4.2.10}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:16, 14 January 2021

Reaction 2-ISOPROPYLMALATESYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • 2-isopropylmalate synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • LEUSYN-PWY, L-leucine biosynthesis:
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6871, 3-methylbutanol biosynthesis (engineered):
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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