Difference between revisions of "GLYC3PDEHYDROGBIOSYN-RXN"

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(Created page with "Category:reaction == Reaction ExchangeSeed-ADENOSYLCOBALAMIN == * direction: ** reversible == Reaction formula == * 1.0 ADENOSYLCOBALAMIN[C-BOUNDARY] '''<=>''' 1.0 A...")
(Created page with "Category:reaction == Reaction GLYC3PDEHYDROGBIOSYN-RXN == * direction: ** left-to-right * common-name: ** glycerol-3-phosphate dehydrogenase ** glycerol-3-phosphate dehydr...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ExchangeSeed-ADENOSYLCOBALAMIN ==
+
== Reaction GLYC3PDEHYDROGBIOSYN-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** glycerol-3-phosphate dehydrogenase
 +
** glycerol-3-phosphate dehydrogenase [nad+]
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.94 ec-1.1.1.94]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[ADENOSYLCOBALAMIN]][C-BOUNDARY] '''<=>''' 1.0 [[ADENOSYLCOBALAMIN]][e]
+
* 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ00878]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16475]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7902]], glucosylglycerol biosynthesis:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5981]], CDP-diacylglycerol biosynthesis III:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY0-1319]], CDP-diacylglycerol biosynthesis II:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5667]], CDP-diacylglycerol biosynthesis I:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* METANETX-RXN : MNXR115935
−
{{#set: nb gene associated=0}}
+
* RHEA:
−
{{#set: nb pathway associated=0}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11094 11094]
−
{{#set: reconstruction category=manual}}
+
* LIGAND-RXN:
−
{{#set: reconstruction tool=curation}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00844 R00844]
−
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: direction=left-to-right}}
−
{{#set: reconstruction source=import_from_medium}}
+
{{#set: common-name=glycerol-3-phosphate dehydrogenase [nad+]|glycerol-3-phosphate dehydrogenase}}
 +
{{#set: ec-number=ec-1.1.1.94}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction GLYC3PDEHYDROGBIOSYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • glycerol-3-phosphate dehydrogenase
    • glycerol-3-phosphate dehydrogenase [nad+]
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7902, glucosylglycerol biosynthesis:
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5981, CDP-diacylglycerol biosynthesis III:
    • 3 reactions found over 5 reactions in the full pathway
  • PWY0-1319, CDP-diacylglycerol biosynthesis II:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5667, CDP-diacylglycerol biosynthesis I:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR115935
  • RHEA:
  • LIGAND-RXN:

Property "Common-name" (as page type) with input value "glycerol-3-phosphate dehydrogenase [nad+" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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