Difference between revisions of "GLYC3PDEHYDROGBIOSYN-RXN"

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(Created page with "Category:reaction == Reaction RXN-13294 == * direction: ** left-to-right * common-name: ** 3-oxo-arachidoyl-coa synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1...")
(Created page with "Category:reaction == Reaction GLYC3PDEHYDROGBIOSYN-RXN == * direction: ** left-to-right * common-name: ** glycerol-3-phosphate dehydrogenase ** glycerol-3-phosphate dehydr...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13294 ==
+
== Reaction GLYC3PDEHYDROGBIOSYN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-oxo-arachidoyl-coa synthase
+
** glycerol-3-phosphate dehydrogenase
 +
** glycerol-3-phosphate dehydrogenase [nad+]
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.199 ec-2.3.1.199]
+
** [http://enzyme.expasy.org/EC/1.1.1.94 ec-1.1.1.94]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[STEAROYL-COA]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14271]][c]
+
* 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11672]]
+
* Gene: [[SJ00878]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ19629]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16475]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ00613]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ06616]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7036]], very long chain fatty acid biosynthesis II:
+
* [[PWY-7902]], glucosylglycerol biosynthesis:
−
** '''14''' reactions found over '''16''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5981]], CDP-diacylglycerol biosynthesis III:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY0-1319]], CDP-diacylglycerol biosynthesis II:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5667]], CDP-diacylglycerol biosynthesis I:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR103450
+
* METANETX-RXN : MNXR115935
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11094 11094]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00844 R00844]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-oxo-arachidoyl-coa synthase}}
+
{{#set: common-name=glycerol-3-phosphate dehydrogenase [nad+]|glycerol-3-phosphate dehydrogenase}}
−
{{#set: ec-number=ec-2.3.1.199}}
+
{{#set: ec-number=ec-1.1.1.94}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction GLYC3PDEHYDROGBIOSYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • glycerol-3-phosphate dehydrogenase
    • glycerol-3-phosphate dehydrogenase [nad+]
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7902, glucosylglycerol biosynthesis:
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5981, CDP-diacylglycerol biosynthesis III:
    • 3 reactions found over 5 reactions in the full pathway
  • PWY0-1319, CDP-diacylglycerol biosynthesis II:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5667, CDP-diacylglycerol biosynthesis I:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR115935
  • RHEA:
  • LIGAND-RXN:

Property "Common-name" (as page type) with input value "glycerol-3-phosphate dehydrogenase [nad+" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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