Difference between revisions of "GLYCEROL-DEHYDRATASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN490-3641 RXN490-3641] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction GLYCEROL-DEHYDRATASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.30 ec-4.2.1.30] == Reaction form...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN490-3641 RXN490-3641] ==
+
== Reaction GLYCEROL-DEHYDRATASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.11.57 ec-1.14.11.57]
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** [http://enzyme.expasy.org/EC/4.2.1.30 ec-4.2.1.30]
−
* synonymous:
 
−
** proline hydroxylase
 
−
** prolyl 4-hydroxylase
 
−
** prolyl hydroxylase
 
−
** proline,2-oxoglutarate 4-dioxygenase
 
−
** protocollagen hydroxylase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[4-HYDROXY-L-PROLINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[GLYCEROL]][c] '''=>''' 1 [[HYDROXYPROPANAL]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10762]]
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* Gene: [[SJ15896]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20526]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20511]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered):
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6130]], glycerol degradation III:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR100324
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=51509 51509]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19766 19766]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01252 R01252]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01047 R01047]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.14.11.57}}
+
{{#set: ec-number=ec-4.2.1.30}}
−
{{#set: synonymous=proline hydroxylase|prolyl 4-hydroxylase|prolyl hydroxylase|proline,2-oxoglutarate 4-dioxygenase|protocollagen hydroxylase}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=0}}
 
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:20, 18 March 2021

Reaction GLYCEROL-DEHYDRATASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7385, 1,3-propanediol biosynthesis (engineered):
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-6130, glycerol degradation III:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR100324
  • RHEA:
  • LIGAND-RXN:





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