Difference between revisions of "GLYCEROL-DEHYDRATASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRITE-REDUCTASE-CYTOCHROME-RXN NITRITE-REDUCTASE-CYTOCHROME-RXN] == * direction: ** left-to-right...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN490-3641 RXN490-3641] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRITE-REDUCTASE-CYTOCHROME-RXN NITRITE-REDUCTASE-CYTOCHROME-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN490-3641 RXN490-3641] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** nitrite reductase (no-forming)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.7.2.1 ec-1.7.2.1]
+
** [http://enzyme.expasy.org/EC/1.14.11.57 ec-1.14.11.57]
 +
* synonymous:
 +
** proline hydroxylase
 +
** prolyl 4-hydroxylase
 +
** prolyl hydroxylase
 +
** proline,2-oxoglutarate 4-dioxygenase
 +
** protocollagen hydroxylase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Cytochromes-C-Reduced]][c] '''+''' 1 [[NITRITE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[Cytochromes-C-Oxidized]][c] '''+''' 1 [[NITRIC-OXIDE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[4-HYDROXY-L-PROLINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15937]]
+
* Gene: [[SJ10762]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ20526]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ20511]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P303-PWY]], ammonia oxidation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P303-PWY P303-PWY]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6748]], nitrate reduction VII (denitrification): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6748 PWY-6748]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6523]], nitrite-dependent anaerobic methane oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6523 PWY-6523]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7084]], nitrifier denitrification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7084 PWY-7084]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=51509 51509]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00783 R00783]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01252 R01252]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q06006 Q06006]
 
−
** [http://www.uniprot.org/uniprot/Q52519 Q52519]
 
−
** [http://www.uniprot.org/uniprot/P24474 P24474]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nitrite reductase (no-forming)}}
+
{{#set: ec-number=ec-1.14.11.57}}
−
{{#set: ec-number=ec-1.7.2.1}}
+
{{#set: synonymous=proline hydroxylase|prolyl 4-hydroxylase|prolyl hydroxylase|proline,2-oxoglutarate 4-dioxygenase|protocollagen hydroxylase}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:26, 26 August 2019

Reaction RXN490-3641

  • direction:
    • left-to-right
  • ec-number:
  • synonymous:
    • proline hydroxylase
    • prolyl 4-hydroxylase
    • prolyl hydroxylase
    • proline,2-oxoglutarate 4-dioxygenase
    • protocollagen hydroxylase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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