Difference between revisions of "GLYCEROL-DEHYDROGENASE-NADP+-RXN"

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(Created page with "Category:reaction == Reaction PHOSPHORIBULOKINASE-RXN == * direction: ** reversible * common-name: ** phosphoribulokinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7....")
(Created page with "Category:reaction == Reaction RXN-13709 == * direction: ** left-to-right * common-name: ** 4-methylsterol monooxygenase * ec-number: ** [http://enzyme.expasy.org/EC/1.14.1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PHOSPHORIBULOKINASE-RXN ==
+
== Reaction RXN-13709 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphoribulokinase
+
** 4-methylsterol monooxygenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.19 ec-2.7.1.19]
+
** [http://enzyme.expasy.org/EC/1.14.18.9 ec-1.14.18.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[RIBULOSE-5P]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-RIBULOSE-15-P2]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[4-METHYL-824-CHOLESTADIENOL]][c] '''+''' 6 [[FERROCYTOCHROME-B5]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''+''' 5 [[PROTON]][c] '''=>''' 1 [[CPD-4702]][c] '''+''' 6 [[FERRICYTOCHROME-B5]][c] '''+''' 4 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04903]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle:
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5723]], Rubisco shunt:
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19368 19368]
+
{{#set: common-name=4-methylsterol monooxygenase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-1.14.18.9}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01523 R01523]
+
{{#set: nb gene associated=0}}
−
* UNIPROT:
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/P23010 P23010]
+
{{#set: reconstruction category=gap-filling}}
−
** [http://www.uniprot.org/uniprot/P0AEX5 P0AEX5]
+
{{#set: reconstruction tool=meneco}}
−
** [http://www.uniprot.org/uniprot/P19923 P19923]
+
{{#set: reconstruction comment=added for gapfilling}}
−
** [http://www.uniprot.org/uniprot/P19924 P19924]
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
** [http://www.uniprot.org/uniprot/P23015 P23015]
 
−
** [http://www.uniprot.org/uniprot/P12033 P12033]
 
−
** [http://www.uniprot.org/uniprot/Q8GRU9 Q8GRU9]
 
−
** [http://www.uniprot.org/uniprot/P09559 P09559]
 
−
** [http://www.uniprot.org/uniprot/P25697 P25697]
 
−
** [http://www.uniprot.org/uniprot/P93681 P93681]
 
−
** [http://www.uniprot.org/uniprot/P19824 P19824]
 
−
** [http://www.uniprot.org/uniprot/P27774 P27774]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=phosphoribulokinase}}
 
−
{{#set: ec-number=ec-2.7.1.19}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 19:03, 14 January 2021

Reaction RXN-13709

  • direction:
    • left-to-right
  • common-name:
    • 4-methylsterol monooxygenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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