Difference between revisions of "GLYCEROL-KIN-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] == * direction: ** left-to-right * common-name: ** choline k...")
 
(Created page with "Category:reaction == Reaction GLYCEROL-KIN-RXN == * direction: ** reversible * common-name: ** glycerol kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.30 ec-2.7...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] ==
+
== Reaction GLYCEROL-KIN-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** choline kinase
+
** glycerol kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.32 ec-2.7.1.32]
+
** [http://enzyme.expasy.org/EC/2.7.1.30 ec-2.7.1.30]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CHOLINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[GLYCEROL]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18340]]
+
* Gene: [[SJ11594]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ15347]]
+
* Gene: [[SJ11595]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
+
* [[PWY-4261]], glycerol degradation I:
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY3O-450]], phosphatidylcholine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7818]], type IV lipoteichoic acid biosynthesis (S. pneumoniae): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7818 PWY-7818]
 
−
** '''2''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-7886]], cell-surface glycoconjugate-linked phosphocholine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7886 PWY-7886]
 
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR100348
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12838 12838]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21647 21647]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01021 R01021]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00847 R00847]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P20485 P20485]
+
** [http://www.uniprot.org/uniprot/P18157 P18157]
−
** [http://www.uniprot.org/uniprot/Q01134 Q01134]
+
** [http://www.uniprot.org/uniprot/P47284 P47284]
−
** [http://www.uniprot.org/uniprot/Q42809 Q42809]
+
** [http://www.uniprot.org/uniprot/Q9CG64 Q9CG64]
−
** [http://www.uniprot.org/uniprot/Q42810 Q42810]
+
** [http://www.uniprot.org/uniprot/Q9V207 Q9V207]
−
** [http://www.uniprot.org/uniprot/Q42811 Q42811]
+
** [http://www.uniprot.org/uniprot/P44400 P44400]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/Q9WX53 Q9WX53]
−
{{#set: common-name=choline kinase}}
+
** [http://www.uniprot.org/uniprot/Q7M0X5 Q7M0X5]
−
{{#set: ec-number=ec-2.7.1.32}}
+
** [http://www.uniprot.org/uniprot/P0A6F3 P0A6F3]
 +
** [http://www.uniprot.org/uniprot/P25013 P25013]
 +
** [http://www.uniprot.org/uniprot/P19255 P19255]
 +
** [http://www.uniprot.org/uniprot/P32190 P32190]
 +
** [http://www.uniprot.org/uniprot/P32189 P32189]
 +
** [http://www.uniprot.org/uniprot/P95907 P95907]
 +
** [http://www.uniprot.org/uniprot/Q49011 Q49011]
 +
** [http://www.uniprot.org/uniprot/O93623 O93623]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=glycerol kinase}}
 +
{{#set: ec-number=ec-2.7.1.30}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction GLYCEROL-KIN-RXN

  • direction:
    • reversible
  • common-name:
    • glycerol kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4261, glycerol degradation I:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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