Difference between revisions of "GLYCEROL-KIN-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] == * direction: ** left-to-right * common-name: ** choline k...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.11-RXN 3.1.4.11-RXN] == * direction: ** left-to-right * common-name: ** phosphatidylinositol...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.11-RXN 3.1.4.11-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** choline kinase
+
** phosphatidylinositol 4,5-bisphosphate lipase c
 +
** phosphatidylinositol phospholipase c
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.32 ec-2.7.1.32]
+
** [http://enzyme.expasy.org/EC/3.1.4.11 ec-3.1.4.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CHOLINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[INOSITOL-1-4-5-TRISPHOSPHATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18340]]
+
* Gene: [[SJ20221]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16244]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ15347]]
+
* Gene: [[SJ16245]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
+
* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
−
** '''11''' reactions found over '''16''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY3O-450]], phosphatidylcholine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450]
+
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7039 PWY-7039]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7818]], type IV lipoteichoic acid biosynthesis (S. pneumoniae): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7818 PWY-7818]
+
* [[LIPASYN-PWY]], phospholipases: [http://metacyc.org/META/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY]
−
** '''2''' reactions found over '''19''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7886]], cell-surface glycoconjugate-linked phosphocholine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7886 PWY-7886]
+
* [[PWY-6367]], D-myo-inositol-5-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6367 PWY-6367]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12838 12838]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33180 33180]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01021 R01021]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03435 R03435]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P20485 P20485]
+
** [http://www.uniprot.org/uniprot/P10687 P10687]
−
** [http://www.uniprot.org/uniprot/Q01134 Q01134]
+
** [http://www.uniprot.org/uniprot/P10894 P10894]
−
** [http://www.uniprot.org/uniprot/Q42809 Q42809]
+
** [http://www.uniprot.org/uniprot/P10686 P10686]
−
** [http://www.uniprot.org/uniprot/Q42810 Q42810]
+
** [http://www.uniprot.org/uniprot/P24135 P24135]
−
** [http://www.uniprot.org/uniprot/Q42811 Q42811]
+
** [http://www.uniprot.org/uniprot/P19174 P19174]
 +
** [http://www.uniprot.org/uniprot/Q00722 Q00722]
 +
** [http://www.uniprot.org/uniprot/Q02158 Q02158]
 +
** [http://www.uniprot.org/uniprot/P32383 P32383]
 +
** [http://www.uniprot.org/uniprot/Q9TS13 Q9TS13]
 +
** [http://www.uniprot.org/uniprot/Q24284 Q24284]
 +
** [http://www.uniprot.org/uniprot/P51178 P51178]
 +
** [http://www.uniprot.org/uniprot/P10688 P10688]
 +
** [http://www.uniprot.org/uniprot/P10895 P10895]
 +
** [http://www.uniprot.org/uniprot/Q60450 Q60450]
 +
** [http://www.uniprot.org/uniprot/P08487 P08487]
 +
** [http://www.uniprot.org/uniprot/Q9STZ3 Q9STZ3]
 +
** [http://www.uniprot.org/uniprot/P40977 P40977]
 +
** [http://www.uniprot.org/uniprot/Q21754 Q21754]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=choline kinase}}
+
{{#set: common-name=phosphatidylinositol 4,5-bisphosphate lipase c|phosphatidylinositol phospholipase c}}
−
{{#set: ec-number=ec-2.7.1.32}}
+
{{#set: ec-number=ec-3.1.4.11}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=4}}
 
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:26, 26 August 2019

Reaction 3.1.4.11-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphatidylinositol 4,5-bisphosphate lipase c
    • phosphatidylinositol phospholipase c
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6351, D-myo-inositol (1,4,5)-trisphosphate biosynthesis: PWY-6351
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7039, phosphatidate metabolism, as a signaling molecule: PWY-7039
    • 4 reactions found over 5 reactions in the full pathway
  • LIPASYN-PWY, phospholipases: LIPASYN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6367, D-myo-inositol-5-phosphate metabolism: PWY-6367
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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