Difference between revisions of "GMP"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] == * direction: ** reversible * common-nam...")
(Created page with "Category:metabolite == Metabolite GMP == * common-name: ** gmp * smiles: ** c(op(=o)([o-])[o-])c1(oc(c(o)c(o)1)n3(c=nc2(c(=o)nc(n)=nc=23))) * inchi-key: ** rqfcjasxjcidsx-...")
 
(7 intermediate revisions by 2 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] ==
+
== Metabolite GMP ==
−
* direction:
 
−
** reversible
 
 
* common-name:
 
* common-name:
−
** methylacrylyl-coa hydratase
+
** gmp
−
** 3-hydroxy-isobutyryl-coa hydro-lyase
+
* smiles:
−
** enoyl-coa hydratase
+
** c(op(=o)([o-])[o-])c1(oc(c(o)c(o)1)n3(c=nc2(c(=o)nc(n)=nc=23)))
−
* ec-number:
+
* inchi-key:
−
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
+
** rqfcjasxjcidsx-uuokfmhzsa-l
−
== Reaction formula ==
+
* molecular-weight:
−
* 1 [[CPD-12173]][c] '''<=>''' 1 [[METHACRYLYL-COA]][c] '''+''' 1 [[WATER]][c]
+
** 361.207
−
== Gene(s) associated with this reaction  ==
+
== Reaction(s) known to consume the compound ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[AGPT]]
−
* Gene: [[SJ03913]]
+
* [[GMP-REDUCT-RXN]]
−
** Category: [[annotation]]
+
* [[GUANPRIBOSYLTRAN-RXN]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[GUANYL-KIN-RXN]]
−
** Category: [[orthology]]
+
* [[RXN-7609]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
== Reaction(s) known to produce the compound ==
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* [[3.6.1.17-RXN]]
−
* Gene: [[SJ07211]]
+
* [[35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN]]
−
** Category: [[annotation]]
+
* [[GMP-SYN-GLUT-RXN]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[GMP-SYN-NH3-RXN]]
−
** Category: [[orthology]]
+
* [[GUANOSINE-DIPHOSPHATASE-RXN]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* [[GUANPRIBOSYLTRAN-RXN]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* [[NTDP]]
−
* Gene: [[SJ21390]]
+
* [[RXN-14140]]
−
** Category: [[annotation]]
+
* [[RXN-14201]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[RXN-15713]]
−
** Category: [[orthology]]
+
* [[RXN-17923]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
== Reaction(s) of unknown directionality ==
−
* Gene: [[SJ03584]]
+
{{#set: common-name=gmp}}
−
** Category: [[annotation]]
+
{{#set: inchi-key=inchikey=rqfcjasxjcidsx-uuokfmhzsa-l}}
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
{{#set: molecular-weight=361.207}}
−
* Gene: [[SJ10275]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14591]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
−
== Pathway(s) ==
 
−
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
== Reconstruction information  ==
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
== External links  ==
 
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31178 31178]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04224 R04224]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P21177 P21177]
 
−
** [http://www.uniprot.org/uniprot/Q08426 Q08426]
 
−
** [http://www.uniprot.org/uniprot/O29814 O29814]
 
−
** [http://www.uniprot.org/uniprot/O29299 O29299]
 
−
** [http://www.uniprot.org/uniprot/O34893 O34893]
 
−
** [http://www.uniprot.org/uniprot/O23520 O23520]
 
−
** [http://www.uniprot.org/uniprot/P76082 P76082]
 
−
** [http://www.uniprot.org/uniprot/P64016 P64016]
 
−
** [http://www.uniprot.org/uniprot/P07896 P07896]
 
−
** [http://www.uniprot.org/uniprot/O53419 O53419]
 
−
** [http://www.uniprot.org/uniprot/P94549 P94549]
 
−
** [http://www.uniprot.org/uniprot/Q13825 Q13825]
 
−
** [http://www.uniprot.org/uniprot/P45361 P45361]
 
−
** [http://www.uniprot.org/uniprot/P28793 P28793]
 
−
** [http://www.uniprot.org/uniprot/P14604 P14604]
 
−
** [http://www.uniprot.org/uniprot/P22414 P22414]
 
−
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
 
−
** [http://www.uniprot.org/uniprot/P34559 P34559]
 
−
** [http://www.uniprot.org/uniprot/Q01373 Q01373]
 
−
** [http://www.uniprot.org/uniprot/P55100 P55100]
 
−
** [http://www.uniprot.org/uniprot/P53526 P53526]
 
−
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
 
−
** [http://www.uniprot.org/uniprot/O52797 O52797]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=methylacrylyl-coa hydratase|enoyl-coa hydratase|3-hydroxy-isobutyryl-coa hydro-lyase}}
 
−
{{#set: ec-number=ec-4.2.1.17}}
 
−
{{#set: nb gene associated=6}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite GMP

  • common-name:
    • gmp
  • smiles:
    • c(op(=o)([o-])[o-])c1(oc(c(o)c(o)1)n3(c=nc2(c(=o)nc(n)=nc=23)))
  • inchi-key:
    • rqfcjasxjcidsx-uuokfmhzsa-l
  • molecular-weight:
    • 361.207

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=GMP&oldid=138670"