Difference between revisions of "GMP-SYN-GLUT-RXN"

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(Created page with "Category:reaction == Reaction 3.4.24.61-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.4.24.61 ec-3.4.24.61] == Reaction formula == *...")
(Created page with "Category:reaction == Reaction GMP-SYN-GLUT-RXN == * direction: ** left-to-right * common-name: ** xanthosine-5'-phosphate:l-glutamine amido-ligase (amp-forming) * ec-numbe...")
 
(3 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.4.24.61-RXN ==
+
== Reaction GMP-SYN-GLUT-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** xanthosine-5'-phosphate:l-glutamine amido-ligase (amp-forming)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.4.24.61 ec-3.4.24.61]
+
** [http://enzyme.expasy.org/EC/6.3.5.2 ec-6.3.5.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[GMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04801]]
+
* Gene: [[SJ08788]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ04799]]
+
* Gene: [[SJ22386]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ04800]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR100384
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11681 11681]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01231 R01231]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P47245 P47245]
+
** [http://www.uniprot.org/uniprot/P32073 P32073]
 +
** [http://www.uniprot.org/uniprot/P49915 P49915]
 +
** [http://www.uniprot.org/uniprot/O25165 O25165]
 +
** [http://www.uniprot.org/uniprot/Q58531 Q58531]
 +
** [http://www.uniprot.org/uniprot/Q9PN49 Q9PN49]
 +
** [http://www.uniprot.org/uniprot/P29727 P29727]
 +
** [http://www.uniprot.org/uniprot/O66601 O66601]
 +
** [http://www.uniprot.org/uniprot/P49056 P49056]
 +
** [http://www.uniprot.org/uniprot/Q9CFJ0 Q9CFJ0]
 +
** [http://www.uniprot.org/uniprot/Q9JW60 Q9JW60]
 +
** [http://www.uniprot.org/uniprot/P44335 P44335]
 +
** [http://www.uniprot.org/uniprot/P38625 P38625]
 +
** [http://www.uniprot.org/uniprot/P49057 P49057]
 +
** [http://www.uniprot.org/uniprot/P04079 P04079]
 +
** [http://www.uniprot.org/uniprot/Q7VLE9 Q7VLE9]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-3.4.24.61}}
+
{{#set: common-name=xanthosine-5'-phosphate:l-glutamine amido-ligase (amp-forming)}}
−
{{#set: nb gene associated=3}}
+
{{#set: ec-number=ec-6.3.5.2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction GMP-SYN-GLUT-RXN

  • direction:
    • left-to-right
  • common-name:
    • xanthosine-5'-phosphate:l-glutamine amido-ligase (amp-forming)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7221, guanosine ribonucleotides de novo biosynthesis:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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