Difference between revisions of "GPH-RXN"

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(Created page with "Category:reaction == Reaction 325-BISPHOSPHATE-NUCLEOTIDASE-RXN == * direction: ** left-to-right * common-name: ** 3'(2'),5'-bisphosphate nucleotidase ** adenosine-3'(2'),...")
(Created page with "Category:reaction == Reaction RXN-11057 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.14.1 ec-1.14.14.1] == Reaction formula == * 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 325-BISPHOSPHATE-NUCLEOTIDASE-RXN ==
+
== Reaction RXN-11057 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 3'(2'),5'-bisphosphate nucleotidase
 
−
** adenosine-3'(2'),5'-bisphosphate nucleotidase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.7 ec-3.1.3.7]
+
** [http://enzyme.expasy.org/EC/1.14.14.1 ec-1.14.14.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-5-ADP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[N-ACETYL-5-METHOXY-TRYPTAMINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''=>''' 1 [[FORMALDEHYDE]][c] '''+''' 1 [[N-ACETYL-SEROTONIN]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11258]]
+
* Gene: [[SJ19505]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ15444]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ05836]]
+
* Gene: [[SJ12861]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ01133]]
+
* Gene: [[SJ18127]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6398]], melatonin degradation I:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10041 10041]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00188 R00188]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q40639 Q40639]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3'(2'),5'-bisphosphate nucleotidase|adenosine-3'(2'),5'-bisphosphate nucleotidase}}
+
{{#set: ec-number=ec-1.14.14.1}}
−
{{#set: ec-number=ec-3.1.3.7}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:20, 15 January 2021

Reaction RXN-11057

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6398, melatonin degradation I:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=GPH-RXN&oldid=114164"