Difference between revisions of "GPH-RXN"
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(Created page with "Category:reaction == Reaction RXN-1382 == * direction: ** reversible * common-name: ** l-serine-phosphatidylethanolamine phosphatidyltransferase * ec-number: ** [http://en...") |
(Created page with "Category:reaction == Reaction GLUTRNAREDUCT-RXN == * direction: ** left-to-right * common-name: ** glutamyl-trna reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.2...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction GLUTRNAREDUCT-RXN == |
* direction: | * direction: | ||
| − | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
| − | ** | + | ** glutamyl-trna reductase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/1.2.1.70 ec-1.2.1.70] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[Charged-GLT-tRNAs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLT-tRNAs]][c] '''+''' 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''+''' 1 [[NADP]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ03601]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): |
| − | + | ** '''6''' reactions found over '''6''' reactions in the full pathway | |
| − | |||
| − | ** ''' | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12346 12346] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R04109 R04109] |
| − | {{#set: direction= | + | {{#set: direction=left-to-right}} |
| − | {{#set: common-name= | + | {{#set: common-name=glutamyl-trna reductase}} |
| − | {{#set: ec-number=ec-2. | + | {{#set: ec-number=ec-1.2.1.70}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:01, 5 January 2021
Contents
Reaction GLUTRNAREDUCT-RXN
- direction:
- left-to-right
- common-name:
- glutamyl-trna reductase
- ec-number:
Reaction formula
- 1 Charged-GLT-tRNAs[c] + 1 NADPH[c] + 1 PROTON[c] => 1 GLT-tRNAs[c] + 1 GLUTAMATE-1-SEMIALDEHYDE[c] + 1 NADP[c]
Gene(s) associated with this reaction
- Gene: SJ03601
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
