Difference between revisions of "GPH-RXN"

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(Created page with "Category:reaction == Reaction GLUTRNAREDUCT-RXN == * direction: ** left-to-right * common-name: ** glutamyl-trna reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.2...")
(Created page with "Category:reaction == Reaction RXN0-5289 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1 ec-1.1.1] == Reaction formula == * 1 GLYCERATE...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction GLUTRNAREDUCT-RXN ==
+
== Reaction RXN0-5289 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** glutamyl-trna reductase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.2.1.70 ec-1.2.1.70]
+
** [http://enzyme.expasy.org/EC/1.1.1 ec-1.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Charged-GLT-tRNAs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLT-tRNAs]][c] '''+''' 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[GLYCERATE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TARTRONATE-S-ALD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ03601]]
+
* Gene: [[SJ06127]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
+
* [[GLYCOLATEMET-PWY]], glycolate and glyoxylate degradation I:
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12346 12346]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18848 18848]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R04109 R04109]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01745 R01745]
{{#set: direction=left-to-right}}
+
{{#set: direction=reversible}}
{{#set: common-name=glutamyl-trna reductase}}
+
{{#set: ec-number=ec-1.1.1}}
{{#set: ec-number=ec-1.2.1.70}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 15:31, 5 January 2021

Reaction RXN0-5289

  • direction:
    • reversible
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLYCOLATEMET-PWY, glycolate and glyoxylate degradation I:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links