Difference between revisions of "GTP"

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(Created page with "Category:gene == Gene SJ06889 == * transcription-direction: ** positive * right-end-position: ** 456508 * left-end-position: ** 418983 * centisome-position: ** 89.40917...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17927 RXN-17927] == * direction: ** left-to-right == Reaction formula == * 1 3Prime-OH-Termin...")
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[[Category:gene]]
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[[Category:reaction]]
== Gene SJ06889 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17927 RXN-17927] ==
* transcription-direction:
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* direction:
** positive
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** left-to-right
* right-end-position:
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== Reaction formula ==
** 456508
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* 1 [[3Prime-OH-Terminated-RNAs]][c] '''+''' 1 [[A-5-prime-PP-5-prime-RNA]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[RNA-Holder]][c]
* left-end-position:
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== Gene(s) associated with this reaction  ==
** 418983
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* Gene: [[SJ03634]]
* centisome-position:
 
** 89.40917   
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
* [[RXN-15559]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* [[RXN-15560]]
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== Pathway(s)  ==
** Category: [[annotation]]
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== Reconstruction information  ==
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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== External links  ==
** Category: [[annotation]]
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{{#set: direction=left-to-right}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb gene associated=1}}
** Category: [[orthology]]
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{{#set: nb pathway associated=0}}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: reconstruction category=annotation}}
== Pathway(s) associated ==
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{{#set: reconstruction tool=pathwaytools}}
* [[PWY-7511]]
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{{#set: reconstruction comment=n.a}}
** '''7''' reactions found over '''9''' reactions in the full pathway
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{{#set: reconstruction source=saccharina_japonica_genome}}
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=456508}}
 
{{#set: left-end-position=418983}}
 
{{#set: centisome-position=89.40917    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb pathway associated=1}}
 

Revision as of 09:28, 27 August 2019

Reaction RXN-17927

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links