Difference between revisions of "GTPOP"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17891 RXN-17891] == * direction: ** left-to-right * common-name: ** arginyl-trna--protein trans...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] == * direction: ** left-to-right * common-name: ** g...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17891 RXN-17891] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** arginyl-trna--protein transferase
+
** glutamate-5-semialdehyde dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.2.8 ec-2.3.2.8]
+
** [http://enzyme.expasy.org/EC/1.2.1.41 ec-1.2.1.41]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[N-terminal-L-cysteine-sulfonate]][c] '''=>''' 1 [[ARG-tRNAs]][c] '''+''' 1 [[L-arginyl-3-sulfo-L-alaninyl-Peptides]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[L-GLUTAMATE-5-P]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03517]]
+
* Gene: [[SJ02923]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ22406]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7799]], Arg/N-end rule pathway (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7799 PWY-7799]
+
* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
−
** '''7''' reactions found over '''14''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19543 19543]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03313 R03313]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9JUK8 Q9JUK8]
 +
** [http://www.uniprot.org/uniprot/P45121 P45121]
 +
** [http://www.uniprot.org/uniprot/P53000 P53000]
 +
** [http://www.uniprot.org/uniprot/P07004 P07004]
 +
** [http://www.uniprot.org/uniprot/P17857 P17857]
 +
** [http://www.uniprot.org/uniprot/P45638 P45638]
 +
** [http://www.uniprot.org/uniprot/P54885 P54885]
 +
** [http://www.uniprot.org/uniprot/O04226 O04226]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=arginyl-trna--protein transferase}}
+
{{#set: common-name=glutamate-5-semialdehyde dehydrogenase}}
−
{{#set: ec-number=ec-2.3.2.8}}
+
{{#set: ec-number=ec-1.2.1.41}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=5}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}

Revision as of 09:31, 27 August 2019

Reaction GLUTSEMIALDEHYDROG-RXN

  • direction:
    • left-to-right
  • common-name:
    • glutamate-5-semialdehyde dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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