Difference between revisions of "GTUP"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.100-RXN 2.1.1.100-RXN] == * direction: ** left-to-right * common-name: ** protein-s-isoprenyl...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16485 RXN-16485] == * direction: ** left-to-right * common-name: ** unsaturated hyaluronan disa...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.100-RXN 2.1.1.100-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16485 RXN-16485] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** protein-s-isoprenylcysteine o-methyltransferase
+
** unsaturated hyaluronan disaccharide hydrolase
−
** protein c-terminal s-isoprenylcysteine carboxyl o-methyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.100 ec-2.1.1.100]
+
** [http://enzyme.expasy.org/EC/3.2.1.179 ec-3.2.1.179]
 +
** [http://enzyme.expasy.org/EC/3.2.1.180 ec-3.2.1.180]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PROTEIN-C-TERMINAL-S-ETC-CYSTEINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTEIN-C-TERMINAL-S-FARNESYL-L-CYSTEINE]][c]
+
* 1 [[CPD-13473]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13122]][c] '''+''' 1 [[N-acetyl-D-glucosamine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02372]]
+
* Gene: [[SJ13212]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ17565]]
+
* Gene: [[SJ15657]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7645]], hyaluronan degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7645 PWY-7645]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* RHEA:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04496 R04496]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31662 31662]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P87014 P87014]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=protein-s-isoprenylcysteine o-methyltransferase|protein c-terminal s-isoprenylcysteine carboxyl o-methyltransferase}}
+
{{#set: common-name=unsaturated hyaluronan disaccharide hydrolase}}
−
{{#set: ec-number=ec-2.1.1.100}}
+
{{#set: ec-number=ec-3.2.1.179|ec-3.2.1.180}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:30, 27 August 2019

Reaction RXN-16485

  • direction:
    • left-to-right
  • common-name:
    • unsaturated hyaluronan disaccharide hydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7645, hyaluronan degradation: PWY-7645
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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