Difference between revisions of "GTUP"

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(Created page with "Category:reaction == Reaction RXN-7775 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.9 ec-1.14.11.9] == Reaction formula == * 1 2...")
(Created page with "Category:reaction == Reaction RXN-22198 == * direction: ** left-to-right == Reaction formula == * 1.0 CPD-24185[c] '''=>''' 1.0 CPD-22095[c] == Gene(s) associated...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-7775 ==
+
== Reaction RXN-22198 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.14.11.9 ec-1.14.11.9]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-6994]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-474]][c] '''+''' 1 [[SUC]][c]
+
* 1.0 [[CPD-24185]][c] '''=>''' 1.0 [[CPD-22095]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ02661]]
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* Gene: [[SJ07557]]
+
** Category: [[manual]]
−
** Category: [[orthology]]
+
*** Source: [[reaction_creator_sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: curation sterols (girard et al.)
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ14670]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14677]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14675]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14672]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08018]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6787]], flavonoid biosynthesis (in equisetum):
+
* [[PWY-8238]]:
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** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''6''' reactions found over '''n.a''' reactions in the full pathway
−
* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[reaction_creator_sjap]]; tool: [[curation]]; comment: gallo2020
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03640 R03640]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.14.11.9}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=gallo2020}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=reaction_creator_sjap}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 13:14, 14 January 2021

Reaction RXN-22198

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-8238:
    • 6 reactions found over n.a reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=GTUP&oldid=88299"