Difference between revisions of "Gcv-H"
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(Created page with "Category:gene == Gene SJ20471 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * 3.4.25.1-RXN ** Catego...") |
(Created page with "Category:gene == Gene SJ10502 == * transcription-direction: ** positive * right-end-position: ** 105289 * left-end-position: ** 93816 * centisome-position: ** 24.124231...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ10502 == |
| + | * transcription-direction: | ||
| + | ** positive | ||
| + | * right-end-position: | ||
| + | ** 105289 | ||
| + | * left-end-position: | ||
| + | ** 93816 | ||
| + | * centisome-position: | ||
| + | ** 24.124231 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.7.7.64-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[GLUC1PURIDYLTRANS-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[UG1PUT]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[UTPHEXPURIDYLYLTRANS-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-7817]] | ||
| + | ** '''6''' reactions found over '''16''' reactions in the full pathway | ||
| + | * [[PWY-7238]] | ||
| + | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-6527]] | ||
| + | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-3801]] | ||
| + | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7343]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-3821]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=105289}} | ||
| + | {{#set: left-end-position=93816}} | ||
| + | {{#set: centisome-position=24.124231 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| + | {{#set: nb pathway associated=6}} | ||
Revision as of 14:23, 26 August 2019
Contents
Gene SJ10502
- transcription-direction:
- positive
- right-end-position:
- 105289
- left-end-position:
- 93816
- centisome-position:
- 24.124231
Organism(s) associated with this gene
Reaction(s) associated
- 2.7.7.64-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GLUC1PURIDYLTRANS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- UG1PUT
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- UTPHEXPURIDYLYLTRANS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7817
- 6 reactions found over 16 reactions in the full pathway
- PWY-7238
- 5 reactions found over 8 reactions in the full pathway
- PWY-6527
- 7 reactions found over 7 reactions in the full pathway
- PWY-3801
- 4 reactions found over 5 reactions in the full pathway
- PWY-7343
- 2 reactions found over 2 reactions in the full pathway
- PWY-3821
- 3 reactions found over 3 reactions in the full pathway
