Difference between revisions of "GlcNAc-GlcA-Gal-Gal-Xyl-Protein"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-302 RXN0-302] == * direction: ** left-to-right * common-name: ** 2c-methyl-d-erythritol 2,4-cy...")
(Created page with "Category:metabolite == Metabolite GlcNAc-GlcA-Gal-Gal-Xyl-Protein == * common-name: ** a [protein]-3-o-(α-d-glcnac-(1→4)-β-d-glca-(1→3)-β-d-gal-(...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-302 RXN0-302] ==
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== Metabolite GlcNAc-GlcA-Gal-Gal-Xyl-Protein ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase
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** a [protein]-3-o-(α-d-glcnac-(1→4)-β-d-glca-(1→3)-β-d-gal-(1→3)-β-d-gal-(1→4)-β-d-xyl)-l-serine
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* ec-number:
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== Reaction(s) known to consume the compound ==
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** [http://enzyme.expasy.org/EC/4.6.1.12 ec-4.6.1.12]
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* [[2.4.1.225-RXN]]
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== Reaction formula ==
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== Reaction(s) known to produce the compound ==
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* 1 [[2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET]][c] '''=>''' 1 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][c] '''+''' 1 [[CMP]][c]
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* [[2.4.1.223-RXN]]
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== Gene(s) associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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* Gene: [[SJ21110]]
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{{#set: common-name=a [protein]-3-o-(α-d-glcnac-(1→4)-β-d-glca-(1→3)-β-d-gal-(1→3)-β-d-gal-(1→4)-β-d-xyl)-l-serine}}
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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== Pathway(s) ==
 
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23865 23865]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R05637 R05637]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase}}
 
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{{#set: ec-number=ec-4.6.1.12}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:17, 18 March 2021

Metabolite GlcNAc-GlcA-Gal-Gal-Xyl-Protein

  • common-name:
    • a [protein]-3-o-(α-d-glcnac-(1→4)-β-d-glca-(1→3)-β-d-gal-(1→3)-β-d-gal-(1→4)-β-d-xyl)-l-serine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Property "Common-name" (as page type) with input value "a [protein]-3-o-(α-d-glcnac-(1→4)-β-d-glca-(1→3)-β-d-gal-(1→3)-β-d-gal-(1→4)-β-d-xyl)-l-serine" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=GlcNAc-GlcA-Gal-Gal-Xyl-Protein&oldid=139443"