Difference between revisions of "H2Oth"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction ACCOAtx == * direction: ** reversible * common-name: ** acetyl-coa:coa antiporter, glyoxysomal == Reaction formula == * 1.0 ACETYL-COA[c]...")
(Created page with "Category:reaction == Reaction THIAMIN-PYROPHOSPHOKINASE-RXN == * direction: ** left-to-right * common-name: ** thiamine pyrophosphokinase * ec-number: ** [http://enzyme.ex...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ACCOAtx ==
+
== Reaction THIAMIN-PYROPHOSPHOKINASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** acetyl-coa:coa antiporter, glyoxysomal
+
** thiamine pyrophosphokinase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.7.6.2 ec-2.7.6.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[ACETYL-COA]][c] '''+''' 1.0 [[CO-A]][x] '''<=>''' 1.0 [[ACETYL-COA]][x] '''+''' 1.0 [[CO-A]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[THIAMINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05600]]
+
* Gene: [[SJ14636]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6907]], thiamine diphosphate biosynthesis III (Staphylococcus):
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6908]], thiamine diphosphate biosynthesis IV (eukaryotes):
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7356]], thiamine salvage IV (yeast):
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6898]], thiamine salvage III:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: common-name=acetyl-coa:coa antiporter, glyoxysomal}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11577 11577]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00619 R00619]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P35202 P35202]
 +
** [http://www.uniprot.org/uniprot/P41888 P41888]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=thiamine pyrophosphokinase}}
 +
{{#set: ec-number=ec-2.7.6.2}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:02, 14 January 2021

Reaction THIAMIN-PYROPHOSPHOKINASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • thiamine pyrophosphokinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6907, thiamine diphosphate biosynthesis III (Staphylococcus):
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6908, thiamine diphosphate biosynthesis IV (eukaryotes):
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7356, thiamine salvage IV (yeast):
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6898, thiamine salvage III:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=H2Oth&oldid=102191"