Difference between revisions of "H2Otx"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AGMATINE-DEIMINASE-RXN AGMATINE-DEIMINASE-RXN] == * direction: ** left-to-right * common-name: ** a...")
(Created page with "Category:reaction == Reaction H2Otx == * direction: ** reversible * common-name: ** h2o transport, peroxisomal == Reaction formula == * 1.0 WATER[c] '''<=>''' 1.0 WA...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AGMATINE-DEIMINASE-RXN AGMATINE-DEIMINASE-RXN] ==
+
== Reaction H2Otx ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** agmatine deaminase
+
** h2o transport, peroxisomal
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.5.3.12 ec-3.5.3.12]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AGMATHINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-597]][c]
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* 1.0 [[WATER]][c] '''<=>''' 1.0 [[WATER]][x]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16434]]
+
* Gene: [[SJ14495]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00591]]
 +
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ARGDEG-III-PWY]], L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-III-PWY ARGDEG-III-PWY]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-43]], putrescine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-43 PWY-43]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18038 18038]
+
{{#set: common-name=h2o transport, peroxisomal}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01416 R01416]
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{{#set: nb pathway associated=0}}
−
{{#set: direction=left-to-right}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: common-name=agmatine deaminase}}
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{{#set: reconstruction tool=pantograph}}
−
{{#set: ec-number=ec-3.5.3.12}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:21, 18 March 2021

Reaction H2Otx

  • direction:
    • reversible
  • common-name:
    • h2o transport, peroxisomal

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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