Difference between revisions of "H2PTEROATESYNTH-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN3-RXN PYRIMSYN3-RXN] == * direction: ** left-to-right * common-name: ** phosphohydroxymethy...")
(Created page with "Category:reaction == Reaction RXN-711 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1 ec-1.3.1] == Reaction formula == * 1 CPD-698[...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN3-RXN PYRIMSYN3-RXN] ==
+
== Reaction RXN-711 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** phosphohydroxymethylpyrimidine kinase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.4.7 ec-2.7.4.7]
+
** [http://enzyme.expasy.org/EC/1.3.1 ec-1.3.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMINO-HYDROXYMETHYL-METHYL-PYR-P]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c]
+
* 1 [[CPD-698]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-709]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18183]]
+
* Gene: [[SJ20675]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6890]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890]
+
* [[PWY-699]], brassinosteroid biosynthesis I:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''25''' reactions in the full pathway
−
* [[PWY-6910]], hydroxymethylpyrimidine salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6910 PWY-6910]
+
* [[PWY-2582]], brassinosteroid biosynthesis II:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''21''' reactions in the full pathway
−
* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19894 19894]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04509 R04509]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07429 R07429]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JTE1 Q9JTE1]
 
−
** [http://www.uniprot.org/uniprot/Q9PNL2 Q9PNL2]
 
−
** [http://www.uniprot.org/uniprot/Q9CI79 Q9CI79]
 
−
** [http://www.uniprot.org/uniprot/Q9CG47 Q9CG47]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=phosphohydroxymethylpyrimidine kinase}}
+
{{#set: ec-number=ec-1.3.1}}
−
{{#set: ec-number=ec-2.7.4.7}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:42, 18 December 2020

Reaction RXN-711

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-699, brassinosteroid biosynthesis I:
    • 3 reactions found over 25 reactions in the full pathway
  • PWY-2582, brassinosteroid biosynthesis II:
    • 4 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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