Difference between revisions of "HACD5h"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINSYN-RXN ARGSUCCINSYN-RXN] == * direction: ** left-to-right * common-name: ** argininosucci...")
 
(Created page with "Category:reaction == Reaction HACD5h == * direction: ** reversible * common-name: ** 3-hydroxyacyl-coa dehydrogenase (c12:0) == Reaction formula == * 1.0 CPD0-2105[h]...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINSYN-RXN ARGSUCCINSYN-RXN] ==
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== Reaction HACD5h ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
 
* common-name:
 
* common-name:
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** argininosuccinate synthase
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** 3-hydroxyacyl-coa dehydrogenase (c12:0)
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/6.3.4.5 ec-6.3.4.5]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[L-CITRULLINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[L-ARGININO-SUCCINATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
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* 1.0 [[CPD0-2105]][h] '''+''' 1.0 [[NADH]][h] '''+''' 1.0 [[PROTON]][h] '''<=>''' 1.0 [[CPD0-2107]][h] '''+''' 1.0 [[NAD]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ10377]]
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* Gene: [[SJ03584]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21390]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
 
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** '''5''' reactions found over '''4''' reactions in the full pathway
 
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-4983]], nitric oxide biosynthesis II (mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4983 PWY-4983]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: direction=reversible}}
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* RHEA:
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{{#set: common-name=3-hydroxyacyl-coa dehydrogenase (c12:0)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10932 10932]
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{{#set: nb gene associated=2}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01954 R01954]
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{{#set: reconstruction category=orthology}}
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* UNIPROT:
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{{#set: reconstruction tool=pantograph}}
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** [http://www.uniprot.org/uniprot/P22768 P22768]
 
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** [http://www.uniprot.org/uniprot/P0A6E4 P0A6E4]
 
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** [http://www.uniprot.org/uniprot/P00966 P00966]
 
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** [http://www.uniprot.org/uniprot/P16460 P16460]
 
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** [http://www.uniprot.org/uniprot/P13256 P13256]
 
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** [http://www.uniprot.org/uniprot/P13257 P13257]
 
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** [http://www.uniprot.org/uniprot/P09034 P09034]
 
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** [http://www.uniprot.org/uniprot/P24532 P24532]
 
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** [http://www.uniprot.org/uniprot/Q9PHK7 Q9PHK7]
 
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** [http://www.uniprot.org/uniprot/P57799 P57799]
 
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** [http://www.uniprot.org/uniprot/Q60174 Q60174]
 
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** [http://www.uniprot.org/uniprot/P44315 P44315]
 
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** [http://www.uniprot.org/uniprot/Q9JWM1 Q9JWM1]
 
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** [http://www.uniprot.org/uniprot/P50986 P50986]
 
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** [http://www.uniprot.org/uniprot/Q06734 Q06734]
 
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** [http://www.uniprot.org/uniprot/P0C1A1 P0C1A1]
 
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** [http://www.uniprot.org/uniprot/Q59491 Q59491]
 
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</div>
 
−
{{#set: direction=left-to-right}}
 
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{{#set: common-name=argininosuccinate synthase}}
 
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{{#set: ec-number=ec-6.3.4.5}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=6}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:19, 18 March 2021

Reaction HACD5h

  • direction:
    • reversible
  • common-name:
    • 3-hydroxyacyl-coa dehydrogenase (c12:0)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=HACD5h&oldid=140602"