Difference between revisions of "HBCO LPAREN nadp RPAREN m"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15088 RXN-15088] == * direction: ** left-to-right * common-name: ** acylglycerol lipase ** 2-ol...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=F16ALDOLASE-RXN F16ALDOLASE-RXN] == * direction: ** reversible * common-name: ** fructose bisphosph...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15088 RXN-15088] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=F16ALDOLASE-RXN F16ALDOLASE-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** acylglycerol lipase
+
** fructose bisphosphate aldolase
−
** 2-oleoylglycerol lipase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.1.23 ec-3.1.1.23]
+
** [http://enzyme.expasy.org/EC/4.1.2.13 ec-4.1.2.13]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD0-1812]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLYCEROL]][c] '''+''' 1 [[OLEATE-CPD]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[FRUCTOSE-16-DIPHOSPHATE]][c] '''<=>''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[GAP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[SJ07752]]
+
* Gene: [[SJ12479]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ02790]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ22520]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ19199]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* Gene: [[SJ13560]]
−
* Gene: [[SJ15654]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ18663]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ16427]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ22328]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ17964]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ11012]]
+
* Gene: [[SJ21513]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ01235]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ03481]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7420]], monoacylglycerol metabolism (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7420 PWY-7420]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[P341-PWY]], glycolysis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
 +
** '''10''' reactions found over '''13''' reactions in the full pathway
 +
</div>
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=2-oleoylglycerol lipase|acylglycerol lipase}}
+
* RHEA:
−
{{#set: ec-number=ec-3.1.1.23}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14732 14732]
−
{{#set: nb gene associated=10}}
+
* LIGAND-RXN:
−
{{#set: nb pathway associated=1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01068 R01068]
−
{{#set: reconstruction category=annotation}}
+
* UNIPROT:
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/Q7LZE8 Q7LZE8]
 +
** [http://www.uniprot.org/uniprot/Q7M2K6 Q7M2K6]
 +
** [http://www.uniprot.org/uniprot/P07764 P07764]
 +
** [http://www.uniprot.org/uniprot/Q9URB4 Q9URB4]
 +
** [http://www.uniprot.org/uniprot/P14223 P14223]
 +
** [http://www.uniprot.org/uniprot/Q07159 Q07159]
 +
** [http://www.uniprot.org/uniprot/P07752 P07752]
 +
** [http://www.uniprot.org/uniprot/P14540 P14540]
 +
** [http://www.uniprot.org/uniprot/P07341 P07341]
 +
** [http://www.uniprot.org/uniprot/P0AB71 P0AB71]
 +
** [http://www.uniprot.org/uniprot/P04075 P04075]
 +
** [http://www.uniprot.org/uniprot/P05062 P05062]
 +
** [http://www.uniprot.org/uniprot/P09972 P09972]
 +
** [http://www.uniprot.org/uniprot/P05064 P05064]
 +
** [http://www.uniprot.org/uniprot/P05063 P05063]
 +
** [http://www.uniprot.org/uniprot/P22197 P22197]
 +
** [http://www.uniprot.org/uniprot/P00883 P00883]
 +
** [http://www.uniprot.org/uniprot/P27995 P27995]
 +
** [http://www.uniprot.org/uniprot/P05065 P05065]
 +
** [http://www.uniprot.org/uniprot/P00884 P00884]
 +
** [http://www.uniprot.org/uniprot/P09117 P09117]
 +
** [http://www.uniprot.org/uniprot/P17784 P17784]
 +
** [http://www.uniprot.org/uniprot/P29356 P29356]
 +
** [http://www.uniprot.org/uniprot/P16096 P16096]
 +
** [http://www.uniprot.org/uniprot/P08440 P08440]
 +
** [http://www.uniprot.org/uniprot/P44429 P44429]
 +
** [http://www.uniprot.org/uniprot/P13243 P13243]
 +
** [http://www.uniprot.org/uniprot/O51401 O51401]
 +
** [http://www.uniprot.org/uniprot/P47269 P47269]
 +
** [http://www.uniprot.org/uniprot/Q9CED4 Q9CED4]
 +
** [http://www.uniprot.org/uniprot/Q9JW15 Q9JW15]
 +
** [http://www.uniprot.org/uniprot/Q59100 Q59100]
 +
** [http://www.uniprot.org/uniprot/Q59101 Q59101]
 +
** [http://www.uniprot.org/uniprot/Q7M4Z5 Q7M4Z5]
 +
** [http://www.uniprot.org/uniprot/Q7M4Z4 Q7M4Z4]
 +
** [http://www.uniprot.org/uniprot/P19537 P19537]
 +
** [http://www.uniprot.org/uniprot/Q01516 Q01516]
 +
** [http://www.uniprot.org/uniprot/Q01517 Q01517]
 +
** [http://www.uniprot.org/uniprot/Q91384 Q91384]
 +
** [http://www.uniprot.org/uniprot/P52210 P52210]
 +
** [http://www.uniprot.org/uniprot/Q42690 Q42690]
 +
** [http://www.uniprot.org/uniprot/P53447 P53447]
 +
** [http://www.uniprot.org/uniprot/Q7LZE9 Q7LZE9]
 +
** [http://www.uniprot.org/uniprot/P53818 P53818]
 +
** [http://www.uniprot.org/uniprot/P46257 P46257]
 +
** [http://www.uniprot.org/uniprot/P46256 P46256]
 +
** [http://www.uniprot.org/uniprot/Q42476 Q42476]
 +
** [http://www.uniprot.org/uniprot/P75089 P75089]
 +
** [http://www.uniprot.org/uniprot/O22486 O22486]
 +
** [http://www.uniprot.org/uniprot/Q40677 Q40677]
 +
** [http://www.uniprot.org/uniprot/O65581 O65581]
 +
** [http://www.uniprot.org/uniprot/Q9SVJ6 Q9SVJ6]
 +
** [http://www.uniprot.org/uniprot/P93565 P93565]
 +
** [http://www.uniprot.org/uniprot/P50923 P50923]
 +
** [http://www.uniprot.org/uniprot/O04975 O04975]
 +
** [http://www.uniprot.org/uniprot/P36580 P36580]
 +
** [http://www.uniprot.org/uniprot/P53444 P53444]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=fructose bisphosphate aldolase}}
 +
{{#set: ec-number=ec-4.1.2.13}}
 +
{{#set: nb gene associated=5}}
 +
{{#set: nb pathway associated=13}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:28, 26 August 2019

Reaction F16ALDOLASE-RXN

  • direction:
    • reversible
  • common-name:
    • fructose bisphosphate aldolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-7385, 1,3-propanediol biosynthesis (engineered): PWY-7385
    • 7 reactions found over 9 reactions in the full pathway
  • P341-PWY, glycolysis V (Pyrococcus): P341-PWY
    • 6 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY, glycolysis III (from glucose): ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • PWY66-399, gluconeogenesis III: PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-1042, glycolysis IV (plant cytosol): PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • SUCSYN-PWY, sucrose biosynthesis I (from photosynthesis): SUCSYN-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-1861, formaldehyde assimilation II (assimilatory RuMP Cycle): PWY-1861
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5484, glycolysis II (from fructose 6-phosphate): PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
    • 10 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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