Difference between revisions of "HDAO10x"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction RXN-9563 == * direction: ** left-to-right * common-name: ** furaneol oxidoreductase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.105 ec...") |
(Created page with "Category:reaction == Reaction OHMETPYRKIN-RXN == * direction: ** left-to-right * common-name: ** hydroxymethylpyrimidine kinase * ec-number: ** [http://enzyme.expasy.org/E...") |
||
| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction OHMETPYRKIN-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** hydroxymethylpyrimidine kinase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.7.1.49 ec-2.7.1.49] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[HMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYL-PYR-P]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ18183]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-6910]], hydroxymethylpyrimidine salvage: |
| − | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| + | * [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): | ||
| + | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-7356]], thiamine salvage IV (yeast): | ||
| + | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23097 23097] |
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R03471 R03471] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/O48881 O48881] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=hydroxymethylpyrimidine kinase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-2.7.1.49}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Revision as of 13:16, 14 January 2021
Contents
Reaction OHMETPYRKIN-RXN
- direction:
- left-to-right
- common-name:
- hydroxymethylpyrimidine kinase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 HMP[c] => 1 ADP[c] + 1 AMINO-HYDROXYMETHYL-METHYL-PYR-P[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ18183
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6910, hydroxymethylpyrimidine salvage:
- 2 reactions found over 2 reactions in the full pathway
- PWY-7357, thiamine formation from pyrithiamine and oxythiamine (yeast):
- 4 reactions found over 6 reactions in the full pathway
- PWY-7356, thiamine salvage IV (yeast):
- 6 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
