Difference between revisions of "HDS"
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(Created page with "Category:reaction == Reaction PLASMALOGEN-SYNTHASE-RXN == * direction: ** reversible * common-name: ** plasmalogen synthase * ec-number: ** [http://enzyme.expasy.org/EC/2....") |
(Created page with "Category:reaction == Reaction 1.8.4.8-RXN == * direction: ** reversible * common-name: ** 3'-phospho-adenylylsulfate reductase * ec-number: ** [http://enzyme.expasy.org/EC...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction 1.8.4.8-RXN == |
* direction: | * direction: | ||
** reversible | ** reversible | ||
* common-name: | * common-name: | ||
| − | ** | + | ** 3'-phospho-adenylylsulfate reductase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.8.4.8 ec-1.8.4.8] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[3-5-ADP]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SO3]][c] '''<=>''' 1 [[PAPS]][c] '''+''' 1 [[Red-Thioredoxin]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ19972]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[SO4ASSIM-PWY]], assimilatory sulfate reduction I: | ||
| + | ** '''3''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11727 11727] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02021 R02021] |
| − | * | + | * UNIPROT: |
| − | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/P17853 P17853] |
| + | ** [http://www.uniprot.org/uniprot/P94498 P94498] | ||
| + | ** [http://www.uniprot.org/uniprot/P17854 P17854] | ||
| + | ** [http://www.uniprot.org/uniprot/Q55309 Q55309] | ||
| + | ** [http://www.uniprot.org/uniprot/P52672 P52672] | ||
| + | ** [http://www.uniprot.org/uniprot/P18408 P18408] | ||
| + | ** [http://www.uniprot.org/uniprot/Q10270 Q10270] | ||
| + | ** [http://www.uniprot.org/uniprot/P72794 P72794] | ||
| + | ** [http://www.uniprot.org/uniprot/Q39619 Q39619] | ||
{{#set: direction=reversible}} | {{#set: direction=reversible}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=3'-phospho-adenylylsulfate reductase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-1.8.4.8}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 11:21, 15 January 2021
Contents
Reaction 1.8.4.8-RXN
- direction:
- reversible
- common-name:
- 3'-phospho-adenylylsulfate reductase
- ec-number:
Reaction formula
- 1 3-5-ADP[c] + 1 Ox-Thioredoxin[c] + 2 PROTON[c] + 1 SO3[c] <=> 1 PAPS[c] + 1 Red-Thioredoxin[c]
Gene(s) associated with this reaction
- Gene: SJ19972
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- SO4ASSIM-PWY, assimilatory sulfate reduction I:
- 3 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
