Difference between revisions of "HDS"

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(Created page with "Category:reaction == Reaction 1.8.4.8-RXN == * direction: ** reversible * common-name: ** 3'-phospho-adenylylsulfate reductase * ec-number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:reaction == Reaction HDS == * direction: ** reversible * common-name: ** 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase == Reaction formula == * 1.0 2C-ME...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 1.8.4.8-RXN ==
+
== Reaction HDS ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
** 3'-phospho-adenylylsulfate reductase
+
** 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.8.4.8 ec-1.8.4.8]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[3-5-ADP]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SO3]][c] '''<=>''' 1 [[PAPS]][c] '''+''' 1 [[Red-Thioredoxin]][c]
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* 1.0 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][h] '''+''' 1.0 [[Protein-Dithiols]][h] '''<=>''' 1.0 [[HYDROXY-METHYL-BUTENYL-DIP]][h] '''+''' 1.0 [[PROTON]][h] '''+''' 1.0 [[Protein-Disulfides]][h] '''+''' 1.0 [[WATER]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ19972]]
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* Gene: [[SJ05642]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[SO4ASSIM-PWY]], assimilatory sulfate reduction I:
 
** '''3''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11727 11727]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02021 R02021]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P17853 P17853]
 
** [http://www.uniprot.org/uniprot/P94498 P94498]
 
** [http://www.uniprot.org/uniprot/P17854 P17854]
 
** [http://www.uniprot.org/uniprot/Q55309 Q55309]
 
** [http://www.uniprot.org/uniprot/P52672 P52672]
 
** [http://www.uniprot.org/uniprot/P18408 P18408]
 
** [http://www.uniprot.org/uniprot/Q10270 Q10270]
 
** [http://www.uniprot.org/uniprot/P72794 P72794]
 
** [http://www.uniprot.org/uniprot/Q39619 Q39619]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: common-name=3'-phospho-adenylylsulfate reductase}}
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{{#set: common-name=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase}}
{{#set: ec-number=ec-1.8.4.8}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:19, 18 March 2021

Reaction HDS

  • direction:
    • reversible
  • common-name:
    • 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links