Difference between revisions of "HDS"

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(Created page with "Category:reaction == Reaction RXN-7978 == * direction: ** left-to-right * synonymous: ** zea-epoxidase == Reaction formula == * 1 CPD1F-130[c] '''+''' 1 OXYGEN-MOLEC...")
(Created page with "Category:reaction == Reaction HDS == * direction: ** reversible * common-name: ** 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase == Reaction formula == * 1.0 2C-ME...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-7978 ==
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== Reaction HDS ==
 
* direction:
 
* direction:
** left-to-right
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** reversible
* synonymous:
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* common-name:
** zea-epoxidase
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** 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD1F-130]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD1F-131]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
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* 1.0 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][h] '''+''' 1.0 [[Protein-Dithiols]][h] '''<=>''' 1.0 [[HYDROXY-METHYL-BUTENYL-DIP]][h] '''+''' 1.0 [[PROTON]][h] '''+''' 1.0 [[Protein-Disulfides]][h] '''+''' 1.0 [[WATER]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ1973]]
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* Gene: [[SJ05642]]
** Category: [[manual]]
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** Category: [[orthology]]
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5945]], violaxanthin, antheraxanthin and zeaxanthin interconversion:
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of zeaxanthin into antheraxanthin (first cycle of xanthophylls)
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: direction=reversible}}
** [http://www.genome.jp/dbget-bin/www_bget?R07199 R07199]
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{{#set: common-name=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase}}
{{#set: direction=left-to-right}}
 
{{#set: synonymous=zea-epoxidase}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
{{#set: reconstruction category=manual}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=curation}}
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{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction comment=transformation of zeaxanthin into antheraxanthin (first cycle of xanthophylls)}}
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{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=sjap}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:19, 18 March 2021

Reaction HDS

  • direction:
    • reversible
  • common-name:
    • 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links