Difference between revisions of "HEMEOSYN-RXN"

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(Created page with "Category:reaction == Reaction RXN-12398 == * direction: ** left-to-right * common-name: ** xyloglucan xxlg oligosaccharide β-galactosidase ** beta-galactosidase ** xx...")
(Created page with "Category:reaction == Reaction RXN-13760 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.83 ec-2.7.7.83] == Reaction formula == * 1 CPD-7...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-12398 ==
+
== Reaction RXN-13760 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** xyloglucan xxlg oligosaccharide β-galactosidase
 
** beta-galactosidase
 
** xxlg xyloglucan oligosaccharide β-galactosidase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23]
+
** [http://enzyme.expasy.org/EC/2.7.7.83 ec-2.7.7.83]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-13376]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 1 [[D-galactopyranose]][c]
+
* 1 [[CPD-7246]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UTP]][c] '''<=>''' 1 [[CPD-14795]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ04558]]
+
* Gene: [[SJ16454]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ14193]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ03139]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ10277]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6807]], xyloglucan degradation II (exoglucanase):
 
** '''3''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
{{#set: common-name=xxlg xyloglucan oligosaccharide &beta;-galactosidase|beta-galactosidase|xyloglucan xxlg oligosaccharide &beta;-galactosidase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R10183 R10183]
{{#set: ec-number=ec-3.2.1.23}}
+
* RHEA:
{{#set: nb gene associated=4}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34363 34363]
{{#set: nb pathway associated=1}}
+
{{#set: direction=reversible}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: ec-number=ec-2.7.7.83}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:00, 5 January 2021

Reaction RXN-13760

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links