Difference between revisions of "HISTONE-ACETYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction DAPASYN-RXN == * direction: ** reversible * common-name: ** 7,8-diaminopelargonic acid synthase * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction 3.4.16.6-RXN == * direction: ** left-to-right * common-name: ** carboxypeptidase d * ec-number: ** [http://enzyme.expasy.org/EC/3.4.16.6 ec-3...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DAPASYN-RXN ==
+
== Reaction 3.4.16.6-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 7,8-diaminopelargonic acid synthase
+
** carboxypeptidase d
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.62 ec-2.6.1.62]
+
** [http://enzyme.expasy.org/EC/3.4.16.6 ec-3.4.16.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[8-AMINO-7-OXONONANOATE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''<=>''' 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE]][c]
+
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Basic-Amino-Acids]][c] '''+''' 1 [[General-Protein-Substrates]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14599]]
+
* Gene: [[SJ12286]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ12659]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16864 16864]
+
{{#set: common-name=carboxypeptidase d}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-3.4.16.6}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03231 R03231]
+
{{#set: nb gene associated=2}}
−
* UNIPROT:
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/Q58696 Q58696]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P53555 P53555]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P44426 P44426]
 
−
** [http://www.uniprot.org/uniprot/Q9JV96 Q9JV96]
 
−
** [http://www.uniprot.org/uniprot/Q9PIJ2 Q9PIJ2]
 
−
** [http://www.uniprot.org/uniprot/P46395 P46395]
 
−
** [http://www.uniprot.org/uniprot/P53656 P53656]
 
−
** [http://www.uniprot.org/uniprot/P22805 P22805]
 
−
** [http://www.uniprot.org/uniprot/P45488 P45488]
 
−
** [http://www.uniprot.org/uniprot/P12995 P12995]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=7,8-diaminopelargonic acid synthase}}
 
−
{{#set: ec-number=ec-2.6.1.62}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:05, 5 January 2021

Reaction 3.4.16.6-RXN

  • direction:
    • left-to-right
  • common-name:
    • carboxypeptidase d
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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