Difference between revisions of "HISTPRATPHYD-RXN"

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(Created page with "Category:reaction == Reaction RXN1F-150 == * direction: ** left-to-right * common-name: ** lycopene β-cyclase * ec-number: ** [http://enzyme.expasy.org/EC/5.5.1.19 ec...")
(Created page with "Category:reaction == Reaction HBCHLm == * direction: ** reversible * common-name: ** 3-hydroxybutanoyl-coa hydro-lyase, mitochondria == Reaction formula == * 1.0 S-3-HYD...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN1F-150 ==
+
== Reaction HBCHLm ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** lycopene β-cyclase
+
** 3-hydroxybutanoyl-coa hydro-lyase, mitochondria
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/5.5.1.19 ec-5.5.1.19]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD1F-114]][c] '''=>''' 1 [[CPD1F-126]][c]
+
* 1.0 [[S-3-HYDROXYBUTANOYL-COA]][m] '''<=>''' 1.0 [[CROTONYL-COA]][m] '''+''' 1.0 [[WATER]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04962]]
+
* Gene: [[SJ00040]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21390]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7591]], okenone biosynthesis:
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7938]], isorenieratene biosynthesis I (actinobacteria):
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7939]], chlorobactene biosynthesis:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5943]], &beta;-carotene biosynthesis:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32222 32222]
+
{{#set: common-name=3-hydroxybutanoyl-coa hydro-lyase, mitochondria}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05341 R05341]
+
{{#set: nb pathway associated=0}}
−
{{#set: direction=left-to-right}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: common-name=lycopene &beta;-cyclase}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: ec-number=ec-5.5.1.19}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 08:40, 15 March 2021

Reaction HBCHLm

  • direction:
    • reversible
  • common-name:
    • 3-hydroxybutanoyl-coa hydro-lyase, mitochondria

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=HISTPRATPHYD-RXN&oldid=130003"