Difference between revisions of "HISTPRATPHYD-RXN"

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(Created page with "Category:reaction == Reaction 3.1.4.11-RXN == * direction: ** left-to-right * common-name: ** phosphatidylinositol 4,5-bisphosphate lipase c ** phosphatidylinositol phosph...")
(Created page with "Category:reaction == Reaction HISTPRATPHYD-RXN == * direction: ** left-to-right * common-name: ** phosphoribosyl-atp pyrophosphatase * ec-number: ** [http://enzyme.expasy....")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.1.4.11-RXN ==
+
== Reaction HISTPRATPHYD-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphatidylinositol 4,5-bisphosphate lipase c
+
** phosphoribosyl-atp pyrophosphatase
−
** phosphatidylinositol phospholipase c
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.4.11 ec-3.1.4.11]
+
** [http://enzyme.expasy.org/EC/3.6.1.31 ec-3.6.1.31]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[INOSITOL-1-4-5-TRISPHOSPHATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20221]]
+
* Gene: [[SJ07444]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ16244]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ16245]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis:
+
* [[HISTSYN-PWY]], L-histidine biosynthesis:
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule:
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[LIPASYN-PWY]], phospholipases:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6367]], D-myo-inositol-5-phosphate metabolism:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR103155
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33180 33180]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22829 22829]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03435 R03435]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04035 R04035]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P10687 P10687]
+
** [http://www.uniprot.org/uniprot/P44434 P44434]
−
** [http://www.uniprot.org/uniprot/P10894 P10894]
+
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
−
** [http://www.uniprot.org/uniprot/P10686 P10686]
+
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
−
** [http://www.uniprot.org/uniprot/P24135 P24135]
+
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
−
** [http://www.uniprot.org/uniprot/P19174 P19174]
+
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
−
** [http://www.uniprot.org/uniprot/Q00722 Q00722]
+
** [http://www.uniprot.org/uniprot/Q9K0J4 Q9K0J4]
−
** [http://www.uniprot.org/uniprot/Q02158 Q02158]
+
** [http://www.uniprot.org/uniprot/O34912 O34912]
−
** [http://www.uniprot.org/uniprot/P32383 P32383]
+
** [http://www.uniprot.org/uniprot/P0A5B1 P0A5B1]
−
** [http://www.uniprot.org/uniprot/Q9TS13 Q9TS13]
+
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
−
** [http://www.uniprot.org/uniprot/Q24284 Q24284]
+
** [http://www.uniprot.org/uniprot/Q9HUB6 Q9HUB6]
−
** [http://www.uniprot.org/uniprot/P51178 P51178]
+
** [http://www.uniprot.org/uniprot/Q57750 Q57750]
−
** [http://www.uniprot.org/uniprot/P10688 P10688]
+
** [http://www.uniprot.org/uniprot/O27344 O27344]
−
** [http://www.uniprot.org/uniprot/P10895 P10895]
+
** [http://www.uniprot.org/uniprot/Q9JVJ9 Q9JVJ9]
−
** [http://www.uniprot.org/uniprot/Q60450 Q60450]
+
** [http://www.uniprot.org/uniprot/O67780 O67780]
−
** [http://www.uniprot.org/uniprot/P08487 P08487]
+
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
−
** [http://www.uniprot.org/uniprot/Q9STZ3 Q9STZ3]
+
** [http://www.uniprot.org/uniprot/P26722 P26722]
−
** [http://www.uniprot.org/uniprot/P40977 P40977]
+
** [http://www.uniprot.org/uniprot/P45353 P45353]
−
** [http://www.uniprot.org/uniprot/Q21754 Q21754]
+
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 +
** [http://www.uniprot.org/uniprot/P50935 P50935]
 +
** [http://www.uniprot.org/uniprot/P00815 P00815]
 +
** [http://www.uniprot.org/uniprot/P07685 P07685]
 +
** [http://www.uniprot.org/uniprot/O59667 O59667]
 +
** [http://www.uniprot.org/uniprot/O82768 O82768]
 +
** [http://www.uniprot.org/uniprot/P10367 P10367]
 +
** [http://www.uniprot.org/uniprot/P06989 P06989]
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=phosphatidylinositol phospholipase c|phosphatidylinositol 4,5-bisphosphate lipase c}}
+
{{#set: common-name=phosphoribosyl-atp pyrophosphatase}}
−
{{#set: ec-number=ec-3.1.4.11}}
+
{{#set: ec-number=ec-3.6.1.31}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction HISTPRATPHYD-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphoribosyl-atp pyrophosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HISTSYN-PWY, L-histidine biosynthesis:
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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