Difference between revisions of "HOLOCYTOCHROME-C-SYNTHASE-RXN"

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(Created page with "Category:reaction == Reaction SAMDECARB-RXN == * direction: ** left-to-right * common-name: ** adenosylmethionine decarboxylase * ec-number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:reaction == Reaction HOLOCYTOCHROME-C-SYNTHASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/4.4.1.17 ec-4.4.1.17] == Reaction fo...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SAMDECARB-RXN ==
+
== Reaction HOLOCYTOCHROME-C-SYNTHASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** adenosylmethionine decarboxylase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.50 ec-4.1.1.50]
+
** [http://enzyme.expasy.org/EC/4.4.1.17 ec-4.4.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PROTON]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINAMINE]][c]
+
* 1 [[Cytochromes-c]][c] '''<=>''' 1 [[Apocytochromes-c]][c] '''+''' 1 [[HEME_C]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16226]]
+
* Gene: [[SJ20234]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ07458]]
+
* Gene: [[SJ00174]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6834]], spermidine biosynthesis III:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[ARGSPECAT-PWY]], spermine biosynthesis:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR115964
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15982 15982]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22651 22651]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00178 R00178]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02480 R02480]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P82184 P82184]
+
** [http://www.uniprot.org/uniprot/P06182 P06182]
−
** [http://www.uniprot.org/uniprot/P21182 P21182]
+
** [http://www.uniprot.org/uniprot/P14187 P14187]
−
** [http://www.uniprot.org/uniprot/P0A7F6 P0A7F6]
+
** [http://www.uniprot.org/uniprot/O25044 O25044]
−
** [http://www.uniprot.org/uniprot/P17707 P17707]
+
** [http://www.uniprot.org/uniprot/O83139 O83139]
−
** [http://www.uniprot.org/uniprot/P28918 P28918]
+
** [http://www.uniprot.org/uniprot/P45706 P45706]
−
** [http://www.uniprot.org/uniprot/P17708 P17708]
+
** [http://www.uniprot.org/uniprot/Q9ZMH0 Q9ZMH0]
−
** [http://www.uniprot.org/uniprot/P50243 P50243]
+
** [http://www.uniprot.org/uniprot/P44202 P44202]
−
** [http://www.uniprot.org/uniprot/P46255 P46255]
+
** [http://www.uniprot.org/uniprot/P53701 P53701]
−
** [http://www.uniprot.org/uniprot/Q04694 Q04694]
+
** [http://www.uniprot.org/uniprot/Q00873 Q00873]
−
** [http://www.uniprot.org/uniprot/Q42679 Q42679]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q42829 Q42829]
+
{{#set: ec-number=ec-4.4.1.17}}
−
** [http://www.uniprot.org/uniprot/P79888 P79888]
 
−
** [http://www.uniprot.org/uniprot/O04009 O04009]
 
−
** [http://www.uniprot.org/uniprot/O24575 O24575]
 
−
** [http://www.uniprot.org/uniprot/Q43820 Q43820]
 
−
** [http://www.uniprot.org/uniprot/Q39676 Q39676]
 
−
** [http://www.uniprot.org/uniprot/Q39677 Q39677]
 
−
** [http://www.uniprot.org/uniprot/O49972 O49972]
 
−
** [http://www.uniprot.org/uniprot/O65354 O65354]
 
−
** [http://www.uniprot.org/uniprot/O02655 O02655]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=adenosylmethionine decarboxylase}}
 
−
{{#set: ec-number=ec-4.1.1.50}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction HOLOCYTOCHROME-C-SYNTHASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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