Difference between revisions of "HOMOCYSMETB12-RXN-HOMO-CYS/5-METHYL-THF//MET/THF.31."

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 1.5.1.9-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.5.1.9 ec-1.5.1.9] == Reaction formula == * 1 NA...")
(Created page with "Category:reaction == Reaction NADPYROPHOSPHAT-RXN == * direction: ** left-to-right * common-name: ** nad+ diphosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.5.1.9-RXN ==
+
== Reaction NADPYROPHOSPHAT-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** nad+ diphosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.5.1.9 ec-1.5.1.9]
+
** [http://enzyme.expasy.org/EC/3.6.1.22 ec-3.6.1.22]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NAD]][c] '''+''' 1 [[SACCHAROPINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ALLYSINE]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[NICOTINAMIDE_NUCLEOTIDE]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22513]]
+
* Gene: [[SJ22529]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian):
+
* [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III (to nicotinamide riboside):
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7761]], NAD salvage pathway II (PNC IV cycle):
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5381]], pyridine nucleotide cycling (plants):
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 +
* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I (PNC VI cycle):
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24521 24521]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11801 11801]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02313 R02313]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00103 R00103]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.5.1.9}}
+
{{#set: common-name=nad+ diphosphatase}}
 +
{{#set: ec-number=ec-3.6.1.22}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:24, 15 January 2021

Reaction NADPYROPHOSPHAT-RXN

  • direction:
    • left-to-right
  • common-name:
    • nad+ diphosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • NAD-BIOSYNTHESIS-II, NAD salvage pathway III (to nicotinamide riboside):
    • 4 reactions found over 3 reactions in the full pathway
  • PWY-7761, NAD salvage pathway II (PNC IV cycle):
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5381, pyridine nucleotide cycling (plants):
    • 6 reactions found over 11 reactions in the full pathway
  • PYRIDNUCSAL-PWY, NAD salvage pathway I (PNC VI cycle):
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=HOMOCYSMETB12-RXN-HOMO-CYS/5-METHYL-THF//MET/THF.31.&oldid=115774"