Difference between revisions of "HOMOCYSMETB12-RXN-HOMO-CYS/5-METHYL-THF//MET/THF.31."

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(Created page with "Category:reaction == Reaction 1.5.1.9-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.5.1.9 ec-1.5.1.9] == Reaction formula == * 1 NA...")
(Created page with "Category:reaction == Reaction RXN-10815 == * direction: ** left-to-right * common-name: ** 2-oxo-3-phenylpropanoate dioxygenase ** phenylpyruvate dioxygenase * ec-number:...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.5.1.9-RXN ==
+
== Reaction RXN-10815 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 2-oxo-3-phenylpropanoate dioxygenase
 +
** phenylpyruvate dioxygenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.5.1.9 ec-1.5.1.9]
+
** [http://enzyme.expasy.org/EC/1.13.11.27 ec-1.13.11.27]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NAD]][c] '''+''' 1 [[SACCHAROPINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ALLYSINE]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-11495]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22513]]
+
* Gene: [[SJ08953]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08954]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian):
+
* [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain):
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24521 24521]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31108 31108]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02313 R02313]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01372 R01372]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-1.5.1.9}}
+
{{#set: common-name=2-oxo-3-phenylpropanoate dioxygenase|phenylpyruvate dioxygenase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-1.13.11.27}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:17, 14 January 2021

Reaction RXN-10815

  • direction:
    • left-to-right
  • common-name:
    • 2-oxo-3-phenylpropanoate dioxygenase
    • phenylpyruvate dioxygenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6318, L-phenylalanine degradation IV (mammalian, via side chain):
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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