Difference between revisions of "HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction HOMOCYSMET-RXN == * direction: ** reversible * common-name: ** cobalamin-independent homocysteine transmethylase * ec-number: ** [http://enzy...")
(Created page with "Category:reaction == Reaction RXN-17483 == * direction: ** left-to-right * common-name: ** geranylgeranyl-bacteriochlorophyll b reductase * ec-number: ** [http://enzyme.ex...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HOMOCYSMET-RXN ==
+
== Reaction RXN-17483 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** cobalamin-independent homocysteine transmethylase
+
** geranylgeranyl-bacteriochlorophyll b reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.14 ec-2.1.1.14]
+
** [http://enzyme.expasy.org/EC/1.3.1.111 ec-1.3.1.111]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-1302]][c] '''+''' 1 [[HOMO-CYS]][c] '''<=>''' 1 [[CPD-1301]][c] '''+''' 1 [[MET]][c]
+
* 1 [[CPD-18890]][c] '''+''' 3 [[NADPH]][c] '''+''' 3 [[PROTON]][c] '''=>''' 1 [[CPD-9091]][c] '''+''' 3 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03226]]
+
* Gene: [[SJ15264]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10794]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5041]], S-adenosyl-L-methionine cycle II:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[HSERMETANA-PWY]], L-methionine biosynthesis III:
 
−
** '''3''' reactions found over '''2''' reactions in the full pathway
 
−
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6151]], S-adenosyl-L-methionine cycle I:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-702]], L-methionine biosynthesis II (plants):
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21199 21199]
+
{{#set: common-name=geranylgeranyl-bacteriochlorophyll b reductase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-1.3.1.111}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04405 R04405]
+
{{#set: nb gene associated=1}}
−
* UNIPROT:
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/P25665 P25665]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P45331 P45331]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q9PN94 Q9PN94]
 
−
** [http://www.uniprot.org/uniprot/O26869 O26869]
 
−
** [http://www.uniprot.org/uniprot/Q9JUT6 Q9JUT6]
 
−
** [http://www.uniprot.org/uniprot/Q9CG55 Q9CG55]
 
−
** [http://www.uniprot.org/uniprot/P05694 P05694]
 
−
** [http://www.uniprot.org/uniprot/Q42699 Q42699]
 
−
** [http://www.uniprot.org/uniprot/Q39586 Q39586]
 
−
** [http://www.uniprot.org/uniprot/O48613 O48613]
 
−
** [http://www.uniprot.org/uniprot/P93263 P93263]
 
−
** [http://www.uniprot.org/uniprot/Q9UT19 Q9UT19]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=cobalamin-independent homocysteine transmethylase}}
 
−
{{#set: ec-number=ec-2.1.1.14}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=5}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:13, 14 January 2021

Reaction RXN-17483

  • direction:
    • left-to-right
  • common-name:
    • geranylgeranyl-bacteriochlorophyll b reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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