Difference between revisions of "HOMOSERDEAM-RXN"

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(Created page with "Category:reaction == Reaction RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48. == * direction: ** left-to-right == Reaction formula == * 1.0 ATP[c] '''+''...")
(Created page with "Category:reaction == Reaction 2.4.1.134-RXN == * direction: ** left-to-right * common-name: ** galactosylxylosylprotein 3-β-galactosyltransferase * ec-number: ** [htt...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48. ==
+
== Reaction 2.4.1.134-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** galactosylxylosylprotein 3-β-galactosyltransferase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.4.1.134 ec-2.4.1.134]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[ATP]][c] '''+''' 1.0 [[CO-A]][c] '''+''' 1.0 [[R-2-HYDROXYSTEARATE]][c] '''=>''' 1.0 [[AMP]][c] '''+''' 1.0 [[CPD-14717]][c] '''+''' 1.0 [[PPI]][c]
+
* 1 [[CPD-14553]][c] '''+''' 1 [[CPD-8202]][c] '''=>''' 1 [[Gal-Gal-Xyl-Proteins]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ00207]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ10256]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ12982]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6557]], glycosaminoglycan-protein linkage region biosynthesis:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11781 11781]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: common-name=galactosylxylosylprotein 3-β-galactosyltransferase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: ec-number=ec-2.4.1.134}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: nb gene associated=3}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:25, 15 January 2021

Reaction 2.4.1.134-RXN

  • direction:
    • left-to-right
  • common-name:
    • galactosylxylosylprotein 3-β-galactosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6557, glycosaminoglycan-protein linkage region biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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