Difference between revisions of "HOMOSERDEAM-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 2.4.1.134-RXN == * direction: ** left-to-right * common-name: ** galactosylxylosylprotein 3-β-galactosyltransferase * ec-number: ** [htt...")
(Created page with "Category:reaction == Reaction 3.4.11.5-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.4.11.5 ec-3.4.11.5] == Reaction formula == * 1 [...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 2.4.1.134-RXN ==
+
== Reaction 3.4.11.5-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** galactosylxylosylprotein 3-β-galactosyltransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.4.1.134 ec-2.4.1.134]
+
** [http://enzyme.expasy.org/EC/3.4.11.5 ec-3.4.11.5]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-14553]][c] '''+''' 1 [[CPD-8202]][c] '''=>''' 1 [[Gal-Gal-Xyl-Proteins]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[Protein-With-N-Terminal-Pro]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ00207]]
+
* Gene: [[SJ20723]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ10256]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ12982]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6557]], glycosaminoglycan-protein linkage region biosynthesis:
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
+
* METANETX-RXN : MNXR115436
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11781 11781]
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00135 R00135]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P46542 P46542]
 +
** [http://www.uniprot.org/uniprot/Q48570 Q48570]
 +
** [http://www.uniprot.org/uniprot/P47266 P47266]
 +
** [http://www.uniprot.org/uniprot/Q9JUV1 Q9JUV1]
 +
** [http://www.uniprot.org/uniprot/P23974 P23974]
 +
** [http://www.uniprot.org/uniprot/P46547 P46547]
 +
** [http://www.uniprot.org/uniprot/P94800 P94800]
 +
** [http://www.uniprot.org/uniprot/O32449 O32449]
 +
** [http://www.uniprot.org/uniprot/P28839 P28839]
 +
** [http://www.uniprot.org/uniprot/P42786 P42786]
 +
** [http://www.uniprot.org/uniprot/P75092 P75092]
 +
** [http://www.uniprot.org/uniprot/P96084 P96084]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=galactosylxylosylprotein 3-β-galactosyltransferase}}
+
{{#set: ec-number=ec-3.4.11.5}}
{{#set: ec-number=ec-2.4.1.134}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:37, 15 March 2021

Reaction 3.4.11.5-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links