Difference between revisions of "HOMOSERDEAM-RXN"

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(Created page with "Category:reaction == Reaction 3.4.11.5-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.4.11.5 ec-3.4.11.5] == Reaction formula == * 1 [...")
(Created page with "Category:reaction == Reaction HOMOSERDEAM-RXN == * direction: ** left-to-right * common-name: ** cystathionine gamma-lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.4...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.4.11.5-RXN ==
+
== Reaction HOMOSERDEAM-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** cystathionine gamma-lyase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.4.11.5 ec-3.4.11.5]
+
** [http://enzyme.expasy.org/EC/4.4.1.1 ec-4.4.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Protein-With-N-Terminal-Pro]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Peptides-holder]][c]
+
* 1 [[HOMO-SER]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20723]]
+
* Gene: [[SJ05357]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05358]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ20026]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR115436
+
* METANETX-RXN : MNXR100733
−
* LIGAND-RXN:
+
* RHEA:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00135 R00135]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24924 24924]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P46542 P46542]
 
−
** [http://www.uniprot.org/uniprot/Q48570 Q48570]
 
−
** [http://www.uniprot.org/uniprot/P47266 P47266]
 
−
** [http://www.uniprot.org/uniprot/Q9JUV1 Q9JUV1]
 
−
** [http://www.uniprot.org/uniprot/P23974 P23974]
 
−
** [http://www.uniprot.org/uniprot/P46547 P46547]
 
−
** [http://www.uniprot.org/uniprot/P94800 P94800]
 
−
** [http://www.uniprot.org/uniprot/O32449 O32449]
 
−
** [http://www.uniprot.org/uniprot/P28839 P28839]
 
−
** [http://www.uniprot.org/uniprot/P42786 P42786]
 
−
** [http://www.uniprot.org/uniprot/P75092 P75092]
 
−
** [http://www.uniprot.org/uniprot/P96084 P96084]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-3.4.11.5}}
+
{{#set: common-name=cystathionine gamma-lyase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-4.4.1.1}}
 +
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction HOMOSERDEAM-RXN

  • direction:
    • left-to-right
  • common-name:
    • cystathionine gamma-lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR100733
  • RHEA:





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