Difference between revisions of "HOMOSERDEHYDROG-RXN"

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(Created page with "Category:reaction == Reaction GLUTKIN-RXN == * direction: ** left-to-right * common-name: ** glutamate 5-kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.2.11 ec-2....")
(Created page with "Category:reaction == Reaction HOMOSERDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** homoserine dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTKIN-RXN ==
+
== Reaction HOMOSERDEHYDROG-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glutamate 5-kinase
+
** homoserine dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.2.11 ec-2.7.2.11]
+
** [http://enzyme.expasy.org/EC/1.1.1.3 ec-1.1.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-GLUTAMATE-5-P]][c]
+
* 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[HOMO-SER]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02923]]
+
* Gene: [[SJ20686]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ06433]]
+
* Gene: [[SJ16019]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ22406]]
+
* Gene: [[SJ22223]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ09366]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis:
+
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis:
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-3341]], L-proline biosynthesis III (from L-ornithine):
 
−
** '''4''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PROSYN-PWY]], L-proline biosynthesis I (from L-glutamate):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis:
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR115966
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14878 14878]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15759 15759]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00239 R00239]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01775 R01775]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PJ29 Q9PJ29]
+
** [http://www.uniprot.org/uniprot/P44505 P44505]
−
** [http://www.uniprot.org/uniprot/Q9CF72 Q9CF72]
+
** [http://www.uniprot.org/uniprot/Q58997 Q58997]
−
** [http://www.uniprot.org/uniprot/Q9JUK7 Q9JUK7]
+
** [http://www.uniprot.org/uniprot/P27725 P27725]
−
** [http://www.uniprot.org/uniprot/P43763 P43763]
+
** [http://www.uniprot.org/uniprot/O67677 O67677]
−
** [http://www.uniprot.org/uniprot/P0A7B5 P0A7B5]
+
** [http://www.uniprot.org/uniprot/P19582 P19582]
−
** [http://www.uniprot.org/uniprot/P17856 P17856]
+
** [http://www.uniprot.org/uniprot/P00561 P00561]
−
** [http://www.uniprot.org/uniprot/P32264 P32264]
+
** [http://www.uniprot.org/uniprot/P00562 P00562]
−
** [http://www.uniprot.org/uniprot/P73071 P73071]
+
** [http://www.uniprot.org/uniprot/P08499 P08499]
−
** [http://www.uniprot.org/uniprot/O04226 O04226]
+
** [http://www.uniprot.org/uniprot/Q9JR84 Q9JR84]
−
** [http://www.uniprot.org/uniprot/O13810 O13810]
+
** [http://www.uniprot.org/uniprot/Q9PIX8 Q9PIX8]
−
** [http://www.uniprot.org/uniprot/P46546 P46546]
+
** [http://www.uniprot.org/uniprot/P56429 P56429]
 +
** [http://www.uniprot.org/uniprot/O27300 O27300]
 +
** [http://www.uniprot.org/uniprot/Q9CGD8 Q9CGD8]
 +
** [http://www.uniprot.org/uniprot/P52985 P52985]
 +
** [http://www.uniprot.org/uniprot/P31116 P31116]
 +
** [http://www.uniprot.org/uniprot/P37142 P37142]
 +
** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
 +
** [http://www.uniprot.org/uniprot/P52986 P52986]
 +
** [http://www.uniprot.org/uniprot/P49079 P49079]
 +
** [http://www.uniprot.org/uniprot/P49080 P49080]
 +
** [http://www.uniprot.org/uniprot/P93402 P93402]
 +
** [http://www.uniprot.org/uniprot/O81852 O81852]
 +
** [http://www.uniprot.org/uniprot/O63067 O63067]
 +
** [http://www.uniprot.org/uniprot/O65027 O65027]
 +
** [http://www.uniprot.org/uniprot/P46806 P46806]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glutamate 5-kinase}}
+
{{#set: common-name=homoserine dehydrogenase}}
−
{{#set: ec-number=ec-2.7.2.11}}
+
{{#set: ec-number=ec-1.1.1.3}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction HOMOSERDEHYDROG-RXN

  • direction:
    • left-to-right
  • common-name:
    • homoserine dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HOMOSERSYN-PWY, L-homoserine biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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