Difference between revisions of "HOMOSERINE-O-ACETYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction DGDPKIN-RXN == * direction: ** left-to-right * common-name: ** dgdp kinase ** nucleoside diphosphate kinase * ec-number: ** [http://enzyme.ex...")
(Created page with "Category:reaction == Reaction HOMOSERINE-O-ACETYLTRANSFERASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.31 ec-2.3.1.31] == Reacti...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DGDPKIN-RXN ==
+
== Reaction HOMOSERINE-O-ACETYLTRANSFERASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** dgdp kinase
 
−
** nucleoside diphosphate kinase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6]
+
** [http://enzyme.expasy.org/EC/2.3.1.31 ec-2.3.1.31]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[DGDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DGTP]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' 1 [[HOMO-SER]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-667]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* Gene: [[SJ20076]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ21705]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07124]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20794]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ10125]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21967]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ21816]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08159]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ16893]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7222]], guanosine deoxyribonucleotides de novo biosynthesis II:
+
* [[PWY-5344]], L-homocysteine biosynthesis:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7226]], guanosine deoxyribonucleotides de novo biosynthesis I:
 
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7224]], purine deoxyribonucleosides salvage:
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR100736
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27691 27691]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13704 13704]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01857 R01857]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01776 R01776]
−
{{#set: direction=left-to-right}}
+
* UNIPROT:
−
{{#set: common-name=dgdp kinase|nucleoside diphosphate kinase}}
+
** [http://www.uniprot.org/uniprot/P08465 P08465]
−
{{#set: ec-number=ec-2.7.4.6}}
+
** [http://www.uniprot.org/uniprot/O60062 O60062]
−
{{#set: nb gene associated=9}}
+
** [http://www.uniprot.org/uniprot/P94891 P94891]
−
{{#set: nb pathway associated=3}}
+
** [http://www.uniprot.org/uniprot/P12917 P12917]
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: direction=reversible}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: ec-number=ec-2.3.1.31}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: nb gene associated=0}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=gap-filling}}
 +
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}
 +
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Latest revision as of 11:22, 18 March 2021

Reaction HOMOSERINE-O-ACETYLTRANSFERASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5344, L-homocysteine biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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