Difference between revisions of "HS"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DHHB-METHYLTRANSFER-RXN DHHB-METHYLTRANSFER-RXN] == * direction: ** left-to-right * common-name: **...")
(Created page with "Category:metabolite == Metabolite CPD-157 == * common-name: ** (2z,4e)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate * smiles: ** c([o-])(=o)ccc(=o)c=cc=c(c([o-])=o)o * inchi-k...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DHHB-METHYLTRANSFER-RXN DHHB-METHYLTRANSFER-RXN] ==
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== Metabolite CPD-157 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** 3-demethylubiquinone-8 3-o-methyltransferase
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** (2z,4e)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/2.1.1.64 ec-2.1.1.64]
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** c([o-])(=o)ccc(=o)c=cc=c(c([o-])=o)o
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* synonymous:
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* inchi-key:
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** 5-demethylubiquinone-8 methyltransferase
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** rfenovfrmprrji-ydcwotkksa-l
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== Reaction formula ==
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* molecular-weight:
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* 1 [[OCTAPRENYL-METHYL-OH-METHOXY-BENZQ]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9956]][c] '''+''' 1 [[PROTON]][c]
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** 212.159
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== Gene(s) associated with this reaction  ==
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== Reaction(s) known to consume the compound ==
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* Gene: [[SJ16864]]
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* [[MHPCHYDROL-RXN]]
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) of unknown directionality ==
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* Gene: [[SJ13007]]
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{{#set: common-name=(2z,4e)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=rfenovfrmprrji-ydcwotkksa-l}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: molecular-weight=212.159}}
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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== Pathway(s) ==
 
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* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6708 PWY-6708]
 
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** '''5''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5870 PWY-5870]
 
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** '''4''' reactions found over '''9''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28680 28680]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P17993 P17993]
 
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** [http://www.uniprot.org/uniprot/Q9JWE6 Q9JWE6]
 
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** [http://www.uniprot.org/uniprot/Q9ZCT9 Q9ZCT9]
 
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** [http://www.uniprot.org/uniprot/P37431 P37431]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=3-demethylubiquinone-8 3-o-methyltransferase}}
 
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{{#set: ec-number=ec-2.1.1.64}}
 
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{{#set: synonymous=5-demethylubiquinone-8 methyltransferase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
 

Revision as of 20:36, 18 December 2020

Metabolite CPD-157

  • common-name:
    • (2z,4e)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate
  • smiles:
    • c([o-])(=o)ccc(=o)c=cc=c(c([o-])=o)o
  • inchi-key:
    • rfenovfrmprrji-ydcwotkksa-l
  • molecular-weight:
    • 212.159

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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