Difference between revisions of "HYDROXY-METHYL-BUTENYL-DIP"

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(Created page with "Category:gene == Gene SJ03315 == * transcription-direction: ** negative * right-end-position: ** 376824 * left-end-position: ** 354540 * centisome-position: ** 67.37269...")
 
(Created page with "Category:metabolite == Metabolite HYDROXY-METHYL-BUTENYL-DIP == * common-name: ** (e)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate * smiles: ** cc(co)=ccop(op([o-])(=o)[o-]...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ03315 ==
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== Metabolite HYDROXY-METHYL-BUTENYL-DIP ==
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* transcription-direction:
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* common-name:
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** negative
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** (e)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
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* right-end-position:
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* smiles:
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** 376824
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** cc(co)=ccop(op([o-])(=o)[o-])(=o)[o-]
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* left-end-position:
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* inchi-key:
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** 354540
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** mdsizrkjvdmqoq-gorduthdsa-k
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* centisome-position:
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* molecular-weight:
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** 67.37269   
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** 259.069
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[HDS]]
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== Reaction(s) associated ==
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* [[IDS1]]
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* [[1.1.3.37-RXN]]
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* [[IDS2]]
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** Category: [[annotation]]
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* [[ISPH2-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-884]]
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* [[L-GULONOLACTONE-OXIDASE-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[HDS]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15878]]
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* [[RXN-13689]]
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* [[RXN0-882]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=(e)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate}}
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* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
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{{#set: inchi-key=inchikey=mdsizrkjvdmqoq-gorduthdsa-k}}
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** Category: [[orthology]]
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{{#set: molecular-weight=259.069}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY3O-6]]
 
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** '''1''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY3DJ-35471]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-6387]]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7953]]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-6386]]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY0-1261]]
 
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** '''3''' reactions found over '''12''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=376824}}
 
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{{#set: left-end-position=354540}}
 
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{{#set: centisome-position=67.37269    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=4}}
 
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{{#set: nb pathway associated=6}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite HYDROXY-METHYL-BUTENYL-DIP

  • common-name:
    • (e)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
  • smiles:
    • cc(co)=ccop(op([o-])(=o)[o-])(=o)[o-]
  • inchi-key:
    • mdsizrkjvdmqoq-gorduthdsa-k
  • molecular-weight:
    • 259.069

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=HYDROXY-METHYL-BUTENYL-DIP&oldid=138319"