Difference between revisions of "HYDROXY-METHYL-BUTENYL-DIP"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPSYN-RXN PRPPSYN-RXN] == * direction: ** reversible * common-name: ** ribose phosphate diphospho...")
(Created page with "Category:metabolite == Metabolite HYDROXY-METHYL-BUTENYL-DIP == * common-name: ** (e)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate * smiles: ** cc(co)=ccop(op([o-])(=o)[o-]...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPSYN-RXN PRPPSYN-RXN] ==
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== Metabolite HYDROXY-METHYL-BUTENYL-DIP ==
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* direction:
 
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** reversible
 
 
* common-name:
 
* common-name:
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** ribose phosphate diphosphokinase
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** (e)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
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** ribose-phosphate diphosphokinase
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* smiles:
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* ec-number:
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** cc(co)=ccop(op([o-])(=o)[o-])(=o)[o-]
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** [http://enzyme.expasy.org/EC/2.7.6.1 ec-2.7.6.1]
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* inchi-key:
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== Reaction formula ==
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** mdsizrkjvdmqoq-gorduthdsa-k
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* 1 [[ATP]][c] '''+''' 1 [[RIBOSE-5P]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PRPP]][c]
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* molecular-weight:
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== Gene(s) associated with this reaction  ==
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** 259.069
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) known to consume the compound ==
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* Gene: [[SJ07300]]
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* [[HDS]]
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** Category: [[annotation]]
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* [[IDS1]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[IDS2]]
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** Category: [[orthology]]
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* [[ISPH2-RXN]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN0-884]]
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* Gene: [[SJ08336]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[HDS]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-15878]]
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** Category: [[orthology]]
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* [[RXN0-882]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) of unknown directionality ==
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* Gene: [[SJ17219]]
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{{#set: common-name=(e)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=mdsizrkjvdmqoq-gorduthdsa-k}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: molecular-weight=259.069}}
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ11019]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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</div>
 
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== Pathway(s) ==
 
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* [[PWY0-662]], PRPP biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-662 PWY0-662]
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15612 15612]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01049 R01049]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q63468 Q63468]
 
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** [http://www.uniprot.org/uniprot/Q9CEI4 Q9CEI4]
 
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** [http://www.uniprot.org/uniprot/O67556 O67556]
 
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** [http://www.uniprot.org/uniprot/P44328 P44328]
 
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** [http://www.uniprot.org/uniprot/Q9PP15 Q9PP15]
 
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** [http://www.uniprot.org/uniprot/P56184 P56184]
 
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** [http://www.uniprot.org/uniprot/P65235 P65235]
 
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** [http://www.uniprot.org/uniprot/Q9CHB8 Q9CHB8]
 
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** [http://www.uniprot.org/uniprot/P42816 P42816]
 
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** [http://www.uniprot.org/uniprot/Q59988 Q59988]
 
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** [http://www.uniprot.org/uniprot/P14193 P14193]
 
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** [http://www.uniprot.org/uniprot/P0A1V6 P0A1V6]
 
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** [http://www.uniprot.org/uniprot/P0A717 P0A717]
 
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** [http://www.uniprot.org/uniprot/P60891 P60891]
 
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** [http://www.uniprot.org/uniprot/P11908 P11908]
 
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** [http://www.uniprot.org/uniprot/P21108 P21108]
 
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** [http://www.uniprot.org/uniprot/P60892 P60892]
 
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** [http://www.uniprot.org/uniprot/P09330 P09330]
 
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** [http://www.uniprot.org/uniprot/P32895 P32895]
 
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** [http://www.uniprot.org/uniprot/Q59489 Q59489]
 
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** [http://www.uniprot.org/uniprot/P38620 P38620]
 
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** [http://www.uniprot.org/uniprot/P38063 P38063]
 
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** [http://www.uniprot.org/uniprot/P38689 P38689]
 
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** [http://www.uniprot.org/uniprot/Q42581 Q42581]
 
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** [http://www.uniprot.org/uniprot/P41831 P41831]
 
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** [http://www.uniprot.org/uniprot/P46585 P46585]
 
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** [http://www.uniprot.org/uniprot/Q42583 Q42583]
 
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** [http://www.uniprot.org/uniprot/Q14558 Q14558]
 
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** [http://www.uniprot.org/uniprot/Q55848 Q55848]
 
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** [http://www.uniprot.org/uniprot/Q49042 Q49042]
 
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** [http://www.uniprot.org/uniprot/O64888 O64888]
 
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** [http://www.uniprot.org/uniprot/Q680A5 Q680A5]
 
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** [http://www.uniprot.org/uniprot/Q93Z66 Q93Z66]
 
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</div>
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=ribose phosphate diphosphokinase|ribose-phosphate diphosphokinase}}
 
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{{#set: ec-number=ec-2.7.6.1}}
 
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{{#set: nb gene associated=4}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite HYDROXY-METHYL-BUTENYL-DIP

  • common-name:
    • (e)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
  • smiles:
    • cc(co)=ccop(op([o-])(=o)[o-])(=o)[o-]
  • inchi-key:
    • mdsizrkjvdmqoq-gorduthdsa-k
  • molecular-weight:
    • 259.069

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=HYDROXY-METHYL-BUTENYL-DIP&oldid=138319"