Difference between revisions of "HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction NAD+-ADP-RIBOSYLTRANSFERASE-RXN == * direction: ** reversible * common-name: ** nad+ adp-ribosyltransferase * ec-number: ** [http://enzyme.ex...")
(Created page with "Category:reaction == Reaction NUCLEOSIDE-DIP-KIN-RXN == * direction: ** left-to-right * common-name: ** nucleoside diphosphate kinase * ec-number: ** [http://enzyme.expasy...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction NAD+-ADP-RIBOSYLTRANSFERASE-RXN ==
+
== Reaction NUCLEOSIDE-DIP-KIN-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** nad+ adp-ribosyltransferase
+
** nucleoside diphosphate kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.30 ec-2.4.2.30]
+
** [http://enzyme.expasy.org/EC/2.7.4.6 ec-2.7.4.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADP-D-Ribosyl-Acceptors]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[ADP-D-Ribosyl-Acceptors]][c] '''+''' 1 [[NIACINAMIDE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[Nucleoside-Diphosphates]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Nucleoside-Triphosphates]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[SJ12212]]
+
* Gene: [[SJ07124]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ05422]]
+
* Gene: [[SJ21705]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ15997]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ20794]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21816]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ00694]]
+
* Gene: [[SJ08159]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ15978]]
+
* Gene: [[SJ21967]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15979]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ21479]]
+
* Gene: [[SJ16893]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ10040]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ13521]]
+
* Gene: [[SJ20076]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10125]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ19643]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
Line 55: Line 54:
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18114 18114]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04176 R04176]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00331 R00331]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P09874 P09874]
+
** [http://www.uniprot.org/uniprot/P15531 P15531]
−
** [http://www.uniprot.org/uniprot/P35875 P35875]
+
** [http://www.uniprot.org/uniprot/P15266 P15266]
−
** [http://www.uniprot.org/uniprot/P26446 P26446]
+
** [http://www.uniprot.org/uniprot/P19804 P19804]
−
** [http://www.uniprot.org/uniprot/P18493 P18493]
+
** [http://www.uniprot.org/uniprot/Q05982 Q05982]
−
** [http://www.uniprot.org/uniprot/Q08824 Q08824]
+
** [http://www.uniprot.org/uniprot/P15532 P15532]
−
** [http://www.uniprot.org/uniprot/P11103 P11103]
+
** [http://www.uniprot.org/uniprot/P22887 P22887]
−
** [http://www.uniprot.org/uniprot/P14299 P14299]
+
** [http://www.uniprot.org/uniprot/P22392 P22392]
−
** [http://www.uniprot.org/uniprot/P27008 P27008]
+
** [http://www.uniprot.org/uniprot/P65533 P65533]
−
** [http://www.uniprot.org/uniprot/P31669 P31669]
+
** [http://www.uniprot.org/uniprot/O84508 O84508]
−
** [http://www.uniprot.org/uniprot/Q11208 Q11208]
+
** [http://www.uniprot.org/uniprot/P84284 P84284]
−
** [http://www.uniprot.org/uniprot/Q11207 Q11207]
+
** [http://www.uniprot.org/uniprot/P43802 P43802]
−
** [http://www.uniprot.org/uniprot/O50017 O50017]
+
** [http://www.uniprot.org/uniprot/O26358 O26358]
−
** [http://www.uniprot.org/uniprot/O24570 O24570]
+
** [http://www.uniprot.org/uniprot/P56075 P56075]
−
** [http://www.uniprot.org/uniprot/Q9ZP54 Q9ZP54]
+
** [http://www.uniprot.org/uniprot/O67528 O67528]
−
** [http://www.uniprot.org/uniprot/P04977 P04977]
+
** [http://www.uniprot.org/uniprot/O83974 O83974]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/O29491 O29491]
−
{{#set: common-name=nad+ adp-ribosyltransferase}}
+
** [http://www.uniprot.org/uniprot/Q9ZE91 Q9ZE91]
−
{{#set: ec-number=ec-2.4.2.30}}
+
** [http://www.uniprot.org/uniprot/Q58661 Q58661]
−
{{#set: nb gene associated=10}}
+
** [http://www.uniprot.org/uniprot/Q9PIG7 Q9PIG7]
 +
** [http://www.uniprot.org/uniprot/Q13232 Q13232]
 +
** [http://www.uniprot.org/uniprot/P48817 P48817]
 +
** [http://www.uniprot.org/uniprot/P0A763 P0A763]
 +
** [http://www.uniprot.org/uniprot/P08879 P08879]
 +
** [http://www.uniprot.org/uniprot/Q02254 Q02254]
 +
** [http://www.uniprot.org/uniprot/Q01402 Q01402]
 +
** [http://www.uniprot.org/uniprot/Q01768 Q01768]
 +
** [http://www.uniprot.org/uniprot/P47922 P47922]
 +
** [http://www.uniprot.org/uniprot/P36010 P36010]
 +
** [http://www.uniprot.org/uniprot/Q07661 Q07661]
 +
** [http://www.uniprot.org/uniprot/Q9S8M2 Q9S8M2]
 +
** [http://www.uniprot.org/uniprot/P47921 P47921]
 +
** [http://www.uniprot.org/uniprot/P47923 P47923]
 +
** [http://www.uniprot.org/uniprot/P81766 P81766]
 +
** [http://www.uniprot.org/uniprot/P50589 P50589]
 +
** [http://www.uniprot.org/uniprot/P74494 P74494]
 +
** [http://www.uniprot.org/uniprot/Q59636 Q59636]
 +
** [http://www.uniprot.org/uniprot/O49203 O49203]
 +
** [http://www.uniprot.org/uniprot/Q39839 Q39839]
 +
** [http://www.uniprot.org/uniprot/Q96559 Q96559]
 +
** [http://www.uniprot.org/uniprot/P39207 P39207]
 +
** [http://www.uniprot.org/uniprot/Q9ZGE0 Q9ZGE0]
 +
** [http://www.uniprot.org/uniprot/P49740 P49740]
 +
** [http://www.uniprot.org/uniprot/Q9UUY8 Q9UUY8]
 +
** [http://www.uniprot.org/uniprot/O64903 O64903]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=nucleoside diphosphate kinase}}
 +
{{#set: ec-number=ec-2.7.4.6}}
 +
{{#set: nb gene associated=9}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}

Revision as of 19:03, 14 January 2021

Reaction NUCLEOSIDE-DIP-KIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • nucleoside diphosphate kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN&oldid=102596"