Difference between revisions of "HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-27...")
 
(Created page with "Category:reaction == Reaction HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN == * direction: ** reversible * common-name: ** hydroxymethyl glutaryl-coa synthase * ec-number: ** [h...")
 
(9 intermediate revisions by 4 users not shown)
Line 1: Line 1:
−
[[Category:pathway]]
+
[[Category:reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161] ==
+
== Reaction HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN ==
−
* taxonomic-range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-2759]
+
** reversible
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157]
 
 
* common-name:
 
* common-name:
−
** folate polyglutamylation
+
** hydroxymethyl glutaryl-coa synthase
−
== Reaction(s) found ==
+
* ec-number:
−
* [[FOLYLPOLYGLUTAMATESYNTH-RXN]]
+
** [http://enzyme.expasy.org/EC/2.3.3.10 ec-2.3.3.10]
−
* [[FORMATETHFLIG-RXN]]
+
== Reaction formula ==
−
* [[FORMYLTHFGLUSYNTH-RXN]]
+
* 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
−
* [[GLYOHMETRANS-RXN]]
+
== Gene(s) associated with this reaction  ==
−
* [[RXN0-2921]]
+
* Gene: [[SJ06617]]
−
== Reaction(s) not found ==
+
** Category: [[annotation]]
−
All reactions of this pathways are in present
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
{{#set: taxonomic-range=tax-2|tax-2157|tax-2759}}
+
** Category: [[orthology]]
−
{{#set: common-name=folate polyglutamylation}}
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
{{#set: nb reaction found=5}}
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
{{#set: completion rate=1.0}}
+
* Gene: [[SJ11593]]
−
{{#set: nb total reaction=5}}
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
== Pathway(s) ==
 +
* [[PWY-7391]], isoprene biosynthesis II (engineered):
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7524]], mevalonate pathway III (Thermoplasma):
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-922]], mevalonate pathway I (eukaryotes and bacteria):
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6174]], mevalonate pathway II (haloarchaea):
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY66-367]], ketogenesis:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7571]], ferrichrome A biosynthesis:
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR107257
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10191 10191]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01978 R01978]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P13704 P13704]
 +
** [http://www.uniprot.org/uniprot/P22791 P22791]
 +
** [http://www.uniprot.org/uniprot/P54870 P54870]
 +
** [http://www.uniprot.org/uniprot/P54869 P54869]
 +
** [http://www.uniprot.org/uniprot/O51626 O51626]
 +
** [http://www.uniprot.org/uniprot/Q9CFA9 Q9CFA9]
 +
** [http://www.uniprot.org/uniprot/P17425 P17425]
 +
** [http://www.uniprot.org/uniprot/Q7LZE7 Q7LZE7]
 +
** [http://www.uniprot.org/uniprot/Q01581 Q01581]
 +
** [http://www.uniprot.org/uniprot/P54961 P54961]
 +
** [http://www.uniprot.org/uniprot/P54839 P54839]
 +
** [http://www.uniprot.org/uniprot/P54874 P54874]
 +
** [http://www.uniprot.org/uniprot/P54868 P54868]
 +
** [http://www.uniprot.org/uniprot/P54873 P54873]
 +
** [http://www.uniprot.org/uniprot/P93773 P93773]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=hydroxymethyl glutaryl-coa synthase}}
 +
{{#set: ec-number=ec-2.3.3.10}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=6}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN

  • direction:
    • reversible
  • common-name:
    • hydroxymethyl glutaryl-coa synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7391, isoprene biosynthesis II (engineered):
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-7524, mevalonate pathway III (Thermoplasma):
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-922, mevalonate pathway I (eukaryotes and bacteria):
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6174, mevalonate pathway II (haloarchaea):
    • 6 reactions found over 7 reactions in the full pathway
  • PWY66-367, ketogenesis:
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7571, ferrichrome A biosynthesis:
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN&oldid=142329"