Difference between revisions of "Heparan-NAc-Glc-6S"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CTPSYN-RXN CTPSYN-RXN] == * direction: ** left-to-right * common-name: ** ctp synthase * ec-number:...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16067 RXN-16067] == * direction: ** left-to-right * common-name: ** 1-acylglycerol-3-phosphate...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CTPSYN-RXN CTPSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16067 RXN-16067] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** ctp synthase
+
** 1-acylglycerol-3-phosphate o-acyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.4.2 ec-6.3.4.2]
+
** [http://enzyme.expasy.org/EC/2.3.1.51 ec-2.3.1.51]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[UTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CTP]][c] '''+''' 1 [[GLT]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[ACYL-ACP]][c] '''+''' 1 [[CPD0-2113]][c] '''=>''' 1 [[1-Stearoyl-L-Phosphatidate]][c] '''+''' 1 [[ACP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07094]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ13501]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ01857]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ13618]]
+
* Gene: [[SJ10647]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ08831]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13801]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18009]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ20565]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09888]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13643]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ15136]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185]
+
* [[PWY-7587]], oleate biosynthesis III (cyanobacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7587 PWY-7587]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7176]], UTP and CTP de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7176 PWY-7176]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7177]], UTP and CTP dephosphorylation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7177 PWY-7177]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26427 26427]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00573 R00573]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q58574 Q58574]
 
−
** [http://www.uniprot.org/uniprot/P44341 P44341]
 
−
** [http://www.uniprot.org/uniprot/Q9PJ84 Q9PJ84]
 
−
** [http://www.uniprot.org/uniprot/Q9JTK1 Q9JTK1]
 
−
** [http://www.uniprot.org/uniprot/P28595 P28595]
 
−
** [http://www.uniprot.org/uniprot/P28274 P28274]
 
−
** [http://www.uniprot.org/uniprot/P38627 P38627]
 
−
** [http://www.uniprot.org/uniprot/P53529 P53529]
 
−
** [http://www.uniprot.org/uniprot/P74208 P74208]
 
−
** [http://www.uniprot.org/uniprot/P13242 P13242]
 
−
** [http://www.uniprot.org/uniprot/P0A7E5 P0A7E5]
 
−
** [http://www.uniprot.org/uniprot/P17812 P17812]
 
−
** [http://www.uniprot.org/uniprot/O64753 O64753]
 
−
** [http://www.uniprot.org/uniprot/O04252 O04252]
 
−
** [http://www.uniprot.org/uniprot/O65445 O65445]
 
−
** [http://www.uniprot.org/uniprot/O74638 O74638]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=ctp synthase}}
+
{{#set: common-name=1-acylglycerol-3-phosphate o-acyltransferase}}
−
{{#set: ec-number=ec-6.3.4.2}}
+
{{#set: ec-number=ec-2.3.1.51}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=10}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:25, 26 August 2019

Reaction RXN-16067

  • direction:
    • left-to-right
  • common-name:
    • 1-acylglycerol-3-phosphate o-acyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7587, oleate biosynthesis III (cyanobacteria): PWY-7587
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=Heparan-NAc-Glc-6S&oldid=22157"