Difference between revisions of "Hyaluronan-NAc-glucosaminide"
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(Created page with "Category:gene == Gene SJ04599 == * transcription-direction: ** positive * right-end-position: ** 376647 * left-end-position: ** 355312 * centisome-position: ** 69.913994...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOLACTOSE-RXN KETOLACTOSE-RXN] == * direction: ** left-to-right * common-name: ** beta-galactosid...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOLACTOSE-RXN KETOLACTOSE-RXN] == |
− | * | + | * direction: |
− | ** | + | ** left-to-right |
− | * | + | * common-name: |
− | ** | + | ** beta-galactosidase |
− | + | ** 3-ketolactose hydrolase | |
− | ** | + | * ec-number: |
− | * | + | ** [http://enzyme.expasy.org/EC/3.2.1.23 ec-3.2.1.23] |
− | ** | + | == Reaction formula == |
− | == | + | * 1 [[3-KETOLACTOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1242]][c] '''+''' 1 [[Glucopyranose]][c] |
− | * [[ | + | == Gene(s) associated with this reaction == |
− | == | + | * Gene: [[SJ14193]] |
− | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | * [[ | + | * Gene: [[SJ04558]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ10277]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ03139]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | == Pathway(s) | + | == Pathway(s) == |
− | * [[PWY- | + | * [[LACTOSEUTIL-PWY]], lactose degradation II: [http://metacyc.org/META/NEW-IMAGE?object=LACTOSEUTIL-PWY LACTOSEUTIL-PWY] |
− | ** ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
− | + | == Reconstruction information == | |
− | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
− | {{#set: left- | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | {{#set: | + | == External links == |
− | {{#set: | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: nb | + | * RHEA: |
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33788 33788] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R04783 R04783] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P06219 P06219] | ||
+ | ** [http://www.uniprot.org/uniprot/P11175 P11175] | ||
+ | ** [http://www.uniprot.org/uniprot/P19668 P19668] | ||
+ | ** [http://www.uniprot.org/uniprot/P20043 P20043] | ||
+ | ** [http://www.uniprot.org/uniprot/P16278 P16278] | ||
+ | ** [http://www.uniprot.org/uniprot/P23780 P23780] | ||
+ | ** [http://www.uniprot.org/uniprot/P24131 P24131] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02603 Q02603] | ||
+ | ** [http://www.uniprot.org/uniprot/Q53790 Q53790] | ||
+ | ** [http://www.uniprot.org/uniprot/P23989 P23989] | ||
+ | ** [http://www.uniprot.org/uniprot/P48982 P48982] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UYG5 Q9UYG5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02604 Q02604] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AC73 P0AC73] | ||
+ | ** [http://www.uniprot.org/uniprot/O58247 O58247] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UYH2 Q9UYH2] | ||
+ | ** [http://www.uniprot.org/uniprot/P00722 P00722] | ||
+ | ** [http://www.uniprot.org/uniprot/P06864 P06864] | ||
+ | ** [http://www.uniprot.org/uniprot/Q47170 Q47170] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59140 Q59140] | ||
+ | ** [http://www.uniprot.org/uniprot/P00723 P00723] | ||
+ | ** [http://www.uniprot.org/uniprot/P94248 P94248] | ||
+ | ** [http://www.uniprot.org/uniprot/O31341 O31341] | ||
+ | ** [http://www.uniprot.org/uniprot/P22498 P22498] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02401 Q02401] | ||
+ | ** [http://www.uniprot.org/uniprot/P26257 P26257] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59422 Q59422] | ||
+ | ** [http://www.uniprot.org/uniprot/P30812 P30812] | ||
+ | ** [http://www.uniprot.org/uniprot/Q12660 Q12660] | ||
+ | ** [http://www.uniprot.org/uniprot/P45582 P45582] | ||
+ | ** [http://www.uniprot.org/uniprot/P49676 P49676] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9SCV3 Q9SCV3] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9SZI5 Q9SZI5] | ||
+ | ** [http://www.uniprot.org/uniprot/O81100 O81100] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42150 Q42150] | ||
+ | ** [http://www.uniprot.org/uniprot/P48980 P48980] | ||
+ | ** [http://www.uniprot.org/uniprot/P48981 P48981] | ||
+ | ** [http://www.uniprot.org/uniprot/O86616 O86616] | ||
+ | ** [http://www.uniprot.org/uniprot/P70753 P70753] | ||
+ | ** [http://www.uniprot.org/uniprot/P29853 P29853] | ||
+ | ** [http://www.uniprot.org/uniprot/P94804 P94804] | ||
+ | </div> | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=3-ketolactose hydrolase|beta-galactosidase}} | ||
+ | {{#set: ec-number=ec-3.2.1.23}} | ||
+ | {{#set: nb gene associated=4}} | ||
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 14:24, 26 August 2019
Contents
Reaction KETOLACTOSE-RXN
- direction:
- left-to-right
- common-name:
- beta-galactosidase
- 3-ketolactose hydrolase
- ec-number:
Reaction formula
- 1 3-KETOLACTOSE[c] + 1 WATER[c] => 1 CPD-1242[c] + 1 Glucopyranose[c]
Gene(s) associated with this reaction
- Gene: SJ14193
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ04558
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ10277
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ03139
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- LACTOSEUTIL-PWY, lactose degradation II: LACTOSEUTIL-PWY
- 1 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: